DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13795 and Slc6a12

DIOPT Version :10

Sequence 1:NP_609138.3 Gene:CG13795 / 34049 FlyBaseID:FBgn0031937 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_059031.1 Gene:Slc6a12 / 50676 RGDID:620255 Length:628 Species:Rattus norvegicus


Alignment Length:589 Identity:135/589 - (22%)
Similarity:260/589 - (44%) Gaps:86/589 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NRGKWDKPTDFMFACFGLALKL-DVFVASFWMFFDMGILGILPYFVYMSIYLVPIMVIHSFMGQF 82
            :||:|....:|:.:..|..:.| :|:...:..:.:.|....:|||::.....:|:..:...:||:
  Rat    49 DRGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFLEVALGQY 113

  Fly    83 SSSGFISAFR-LSPFFKGMGYVSGFLTISMLIYYSIFAAVPLLFIINSFRPTLPW-SCEGLSSWH 145
            ||.|.::|:| :.|..:|:|..|..:...:.|||.|..|..|.::.:||...||| :|  .:||:
  Rat   114 SSQGSVTAWRKICPLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWELPWTTC--TNSWN 176

  Fly   146 --------NGSATLSSSC--NKTLILEDFSEYNRSHQLLHVPSVLYFQNHYDSMQQDAVPDWYKD 200
                    |.|:|.::|.  |.|..:.:|.|    .::|.:.|.::...                
  Rat   177 TEHCVDFLNYSSTRAASYSENFTSPVMEFWE----RRVLGITSGIHDLG---------------- 221

  Fly   201 YELSWHFVGLFAIIWVVIAFIFYKFSETAKFGKLIRYMVIVTLVLLLVCFVRFLFLPGALNGLHR 265
             .|.|.......:.|::..|..:|..::.  ||::.:......::|::..:|.:.||||..|:..
  Rat   222 -SLRWELALCLLLAWIICYFCIWKGVKST--GKVVYFTATFPYLMLIILLIRGVTLPGAYQGIVF 283

  Fly   266 YVTP---KASD----MAMGVVSTFIMVLHAFGAGWGSVITLSSFNGFKTDIMSYSWIISF---GQ 320
            |:.|   :..|    |..|.     .:..:|....|.:..|.|:|.:..:....|..:.|   ..
  Rat   284 YLKPDLLRLKDPQVWMDAGT-----QIFFSFAICQGCLTALGSYNKYHNNCYRDSIALCFLNSAT 343

  Fly   321 IFI--YIMFGMVSFMLEHYFNELSDVDDNGHVLSHWLLYLSSASALSTMAWPNLWTFIYYSMLLI 383
            .|:  :::|.::.||.:.....:|:|.::|..|:    :::...|::.|....||:.:::.|||.
  Rat   344 SFVAGFVVFSILGFMAQEQGVPISEVAESGPGLA----FIAFPKAVTMMPLSQLWSCLFFLMLLF 404

  Fly   384 AAL---IVMTTQIFTVLQSLFDEFEVLRVRKQEVTFGLIGGIA----LCSFYFCTNHGIIFFSAL 441
            ..|   .|....:.|....:|.:    ::||:.....||..:|    |......|..|:..|...
  Rat   405 LGLDSQFVCMECLVTASMDMFPQ----QLRKRGRRELLILAVAIVCYLMGLLLVTEGGMYIFQLF 465

  Fly   442 GLDAIFSHSLLHLLLLLVVL--WIYGRERFQRDIEFMLG-QPFASWKVFILRFIAPIILVICLLA 503
            ...|.....||.|.|..|:.  |:||.:||..::|.|:| :|:...|:..| |:.|   .:| ||
  Rat   466 DYYASSGICLLFLSLFEVICIGWVYGADRFYDNVEDMIGYRPWPLVKISWL-FLTP---GLC-LA 525

  Fly   504 GIALSISEHS---YSTTVV-----FVMSIVLVVLPILAIPGYGFYYLYQSTGTFCERFKRTCRPT 560
            ....|:|:::   |:...:     :.:..:|....:..:|.:....|.::.|:|.:|.:|...|.
  Rat   526 TFFFSLSKYTPLKYNNVYIYPSWGYSIGWLLAFSSMACVPLFIIITLLKTQGSFKKRLQRLITPD 590

  Fly   561 DWYP 564
            ...|
  Rat   591 PSLP 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13795NP_609138.3 SLC5-6-like_sbd 27..505 CDD:271356 120/512 (23%)
Slc6a12NP_059031.1 SLC5-6-like_sbd 49..589 CDD:444915 133/582 (23%)

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