DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13795 and Slc6a3

DIOPT Version :10

Sequence 1:NP_609138.3 Gene:CG13795 / 34049 FlyBaseID:FBgn0031937 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_036826.1 Gene:Slc6a3 / 24898 RGDID:3715 Length:619 Species:Rattus norvegicus


Alignment Length:592 Identity:138/592 - (23%)
Similarity:256/592 - (43%) Gaps:72/592 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RGKWDKPTDFMFACFGLALKLDVFVASFWMF-----FDMGILGILPYFVYMSIYLVPIMVIHSFM 79
            |..|.|..||:.:..|.|:.|    |:.|.|     .:.|...::||.::|.|..:|:..:...:
  Rat    60 RETWSKKIDFLLSVIGFAVDL----ANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELAL 120

  Fly    80 GQFSSSGFISAFRLSPFFKGMGYVSGFLTISMLIYYSIFAAVPLLFIINSFRPTLPW-SCEGLSS 143
            |||:..|....:::.|..||:|:....::..:..:|::..|..|.:..:||...||| .|.  ::
  Rat   121 GQFNREGAAGVWKICPVLKGVGFTVILISFYVGFFYNVIIAWALHYFFSSFTMDLPWIHCN--NT 183

  Fly   144 WH--NGSATLSSSCNKTLILED-FSEYNRSHQLLHVPSVLYFQN-----HYDSMQQDAVPDWYKD 200
            |:  |.|...:|:.:..|.|.| |..         .|:..||:.     |......|..|.    
  Rat   184 WNSPNCSDAHASNSSDGLGLNDTFGT---------TPAAEYFERGVLHLHQSRGIDDLGPP---- 235

  Fly   201 YELSWHFVGLFAIIWVVIAFIFYKFSETAKFGKLIRYMVIVTLVLLLVCFVRFLFLPGALNGLHR 265
               .|.......::.|::.|..:|..:|:  ||::.....:..|:|....:|.:.||||::|:..
  Rat   236 ---RWQLTACLVLVIVLLYFSLWKGVKTS--GKVVWITATMPYVVLTALLLRGVTLPGAMDGIRA 295

  Fly   266 YVTPKASDM--AMGVVSTFIMVLHAFGAGWGSVITLSSFNGFKTD-------IMSYSWIISFGQI 321
            |::.....:  |...:.....|..:.|.|:|.:|..||:|.|..:       ..|.:.:.||...
  Rat   296 YLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSINSLTSFSSG 360

  Fly   322 FIYIMFGMVSFMLEHYFNELSDVDDNGHVLSHWLLYLSSASALSTMAWPNLWTFIYYSMLLIAAL 386
            |  ::|..:.:|.:.:...:.||..:|    ..|:::....|::|:...:.|..:::.|||...:
  Rat   361 F--VVFSFLGYMAQKHNVPIRDVATDG----PGLIFIIYPEAIATLPLSSAWAAVFFLMLLTLGI 419

  Fly   387 IVMTTQIFTVLQSLFDEFEVLRVRKQEVTFGLIGGIALCSFYFCTNHGIIFFSALGLDAIFSHSL 451
            ......:.:|:..|.|||::|...::..|.|::....|.|.:..||.||..|:.|...|..:..|
  Rat   420 DSAMGGMESVITGLVDEFQLLHRHRELFTLGIVLATFLLSLFCVTNGGIYVFTLLDHFAAGTSIL 484

  Fly   452 LHLLLLLV-VLWIYGRERFQRDIEFMLGQ-PFASWKVFILRFIAPIILVICLLAGIALSISEHSY 514
            ..:|:..: |.|.||.::|..||:.|.|| |...|:: ..:.::|..|:..::..|......| |
  Rat   485 FGVLIEAIGVAWFYGVQQFSDDIKQMTGQRPNLYWRL-CWKLVSPCFLLYVVVVSIVTFRPPH-Y 547

  Fly   515 STTV----VFVMSIVLVVLPILAIPGYGFYYLYQSTGTFCERFKRTCRPTDWYPVEMEHRQQYEE 575
            ...:    ...:..::....:..:|.|..|......|:|.|:......|      |.:|     :
  Rat   548 GAYIFPDWANALGWIIATSSMAMVPIYATYKFCSLPGSFREKLAYAITP------EKDH-----Q 601

  Fly   576 AVDNTEM 582
            .||..|:
  Rat   602 LVDRGEV 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13795NP_609138.3 SLC5-6-like_sbd 27..505 CDD:271356 120/502 (24%)
Slc6a3NP_036826.1 SLC6sbd_DAT1 60..613 CDD:212083 138/592 (23%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 5/28 (18%)

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