DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13795 and Slc6a20b

DIOPT Version :10

Sequence 1:NP_609138.3 Gene:CG13795 / 34049 FlyBaseID:FBgn0031937 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_035861.2 Gene:Slc6a20b / 22599 MGIID:1336891 Length:635 Species:Mus musculus


Alignment Length:645 Identity:144/645 - (22%)
Similarity:250/645 - (38%) Gaps:175/645 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RGKWDKPTDFMFACFGLALKLDVFVASFWMF------FDMGILGILPYFVYMSIYLVPIMVIHSF 78
            |.|||.|..|:..|...|:.|    .:.|.|      :..|.. ::||.:.:.:..:|::.:...
Mouse    48 RPKWDNPLQFLLVCISYAVGL----GNVWRFPYLCQMYGGGSF-LVPYIIMLIVEGMPLLYLELA 107

  Fly    79 MGQFSSSGFISAFR-LSPFFKGMGYVSGFLTISML--IYYSIFAAVPLLFIINSFRPTLPWSCEG 140
            :||....|.|.|:| :||:..|:|..|  |.:|.|  :|:::.....|.::.:||:..||||...
Mouse   108 VGQRMRQGSIGAWRTISPYLSGVGIAS--LVVSFLASVYFNVINTWALWYLFHSFQDPLPWSVCP 170

  Fly   141 LSSWHNGSATLSSSCNKTLILEDFSEYNRSHQLLHVPSVLYFQNHYDSMQQDAVPDWY-KDYELS 204
            |:|.|.|   ....|.|                  ..|..||              || |...:|
Mouse   171 LNSNHTG---YDEECEK------------------ASSTQYF--------------WYRKTLNIS 200

  Fly   205 ----------WHFVGLFAIIWVVIAFIFYKFSETAKFGKLIRYMVIVTLVLLLVCFVRFLFLPGA 259
                      |.......:.|:::.....:.:|:.  ||::.:...:...:|::..||.|.|.||
Mouse   201 PSIQENGGVQWEPALCLTLAWLMVYLCILRGTEST--GKVVYFTTSLPYFVLIIYLVRGLTLHGA 263

  Fly   260 LNGLHRYVTPKASDMA--MGVVSTFIMVLHAFGAGWGSVITLSSFNGFKTDIMSYSWIIS----- 317
            .|||....|||...:|  ...::....:..:.|.|.|.:|..:|:|....|...::.|:|     
Mouse   264 TNGLAYMFTPKIEQLANPKAWINAATQIFFSLGLGCGGLIAFASYNEPSNDCQKHALIVSVINST 328

  Fly   318 ---FGQIFIYIMFGMV------------------SFMLEHYFNELSDVDD------------NGH 349
               |..|..:.::|..                  ||.||..|..:|::::            ...
Mouse   329 TAIFSSIVTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFLTVSNLEEVKNYLASTYPNKYSE 393

  Fly   350 VLSH-----------------WLLYLSSASALSTMAWPNLWTFIYYSMLLIAALIVMTTQIFTVL 397
            |..|                 .|.::....|:..|....||:.:|:.|||...:..|......:|
Mouse   394 VFPHIRNCSLESELDTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLTLGMGSMVGTGTAIL 458

  Fly   398 QSLFDEFEVLRVRKQEVTFGLIGGIALCSFYFCTNHGIIFFSALG---LDAIFSHSLLHLLLLLV 459
            ..|.|...:.....:|...||: .:..|:.      |::|....|   .| :|:.....|.|||:
Mouse   459 TPLTDSKIISSYLPKEAISGLV-CLLNCAI------GMVFTMEAGNYWFD-LFNDYTATLSLLLI 515

  Fly   460 VL-------WIYGRERFQRDIEFMLGQPFA-SWKVFILRFIAPIILV---ICLLAGIALS----- 508
            ||       ::||.:||:.|:..|.|:..: .||| :..|::|:::|   |..|:...|:     
Mouse   516 VLVETIAVCYVYGLKRFESDLRAMTGRTLSWYWKV-MWAFVSPLLIVGLFIFYLSDYILTGTLQY 579

  Fly   509 ---------ISEHSYSTTVVFVMSIVL----VVLPILAIPGYGFYYLYQSTGTFCER-FK 554
                     :....|.|..:.|:.:::    :.:|::|:            |||..| ||
Mouse   580 QAWDATQGHVVTKDYPTYALAVIGLLVASSTMCIPLVAL------------GTFVTRHFK 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13795NP_609138.3 SLC5-6-like_sbd 27..505 CDD:271356 127/568 (22%)
Slc6a20bNP_035861.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38
SLC5-6-like_sbd 45..620 CDD:444915 138/636 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.