DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13795 and snf-3

DIOPT Version :10

Sequence 1:NP_609138.3 Gene:CG13795 / 34049 FlyBaseID:FBgn0031937 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_493910.2 Gene:snf-3 / 173493 WormBaseID:WBGene00004902 Length:600 Species:Caenorhabditis elegans


Alignment Length:598 Identity:127/598 - (21%)
Similarity:256/598 - (42%) Gaps:110/598 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SPDLNRGKWDKPTDFMFACFGLALKL-DVFVASFWMFFDMGILGILPYFVYMSIYLVPIMVIHSF 78
            |.:.:||:|....||:.:....|:.| :|:...:..:.:.|...::.|.::..:..|||.::...
 Worm    25 SEEPDRGQWTGKFDFLMSMVAYAVGLGNVWRFPYLCYKNGGGSFLVVYMIFFCLAAVPIFLMEVT 89

  Fly    79 MGQFSSSGFISAFRLSPFFKGMGYVSGFLTISMLIYYSIFAAVPLLFIINSFRPTLPW-SCEGLS 142
            :||:...|.:..:.:.|.|:|:|..:..:....:.|:.:..|..:.::|:|.....|| :|.  :
 Worm    90 VGQYLQKGAMEMWLMCPLFRGVGIGNVVIAFMCIAYFCVIVAWAMFYMISSIAWVFPWETCN--N 152

  Fly   143 SWHNGSATLSSSCNKTLILEDFSEYNRSHQLL-----HVPSVLYFQNHYDSMQQDAVPDWYK--- 199
            .|::.:.....        |:|:|..|...|:     |..:         |::|    .|.|   
 Worm   153 YWNDATCVTGK--------ENFTELARIKALVASAGGHTQT---------SVEQ----FWEKRVL 196

  Fly   200 ----DYE----LSWHFVGLFAIIWVVIAFIFYKFSETAKFGKLIRYMVIVTLVLLLVCFVRFLFL 256
                |..    :.|....:.|..|:::.|..:|....|:  |.:.:..:...||:.:..:|.|.|
 Worm   197 HDTGDISEFGGIQWELFFIMAAAWLIVYFALWKGITQAR--KFVYFCALFPYVLIFILLIRGLTL 259

  Fly   257 PGALNGLHRYVTPKASDMAMGVV--STFIMVLHAFGAGWGSVITLSSFNGFK----TDIMSYSWI 315
            .||..|::.|:.|.|:.:....|  .....|.:::|.|:|::|.|.|.|.|.    .|.::..:|
 Worm   260 EGAGTGIYFYLKPNATRLLDTAVWKDAGTQVFYSYGVGFGALIALGSHNKFNHNCFKDAITMCFI 324

  Fly   316 -----ISFGQIFIYIMFGMVSFMLEHYFNELSDVDDNGHVLSHWLLYLSSASALSTMAWPNLWTF 375
                 |:.|    :.:|.::.:|......::|::...|..|:    :|:.....|.:....::..
 Worm   325 NGCTSITAG----FAVFSILGYMSHVAQKDISEIVKPGVGLA----FLAYPEVASNLPMKQVFAV 381

  Fly   376 IYYSMLLIAAL---IVMTTQIFTVLQSLFDEFEVLRVRKQEVTFGLIGGIALCSFYFCT------ 431
            :::.|:.|..|   :.|...:||.|:   |.|.:||..|:: :.|:     .|.|:||.      
 Worm   382 LFFLMITILGLDSQVCMMEGLFTALE---DAFPILRKYKKQ-SLGI-----FCLFFFCIGIPMVT 437

  Fly   432 ---NHGIIFFSALGLDAIFSHSLLHLLLLLVV--LWIYGRERFQRDIEFMLGQPFASWKVFILRF 491
               :|.:..|.|.|..   .::||.::...||  .:.:|....::.:..|:|........::.:|
 Worm   438 HSGSHWLTLFDAYGAS---GYALLFVVFFEVVGLAYGFGAHNIRKALHEMIGVTLPKGIEYVWKF 499

  Fly   492 IAP----IILVICLL--------AGIALSISEHSYSTTVVFVMSIVLVVLPILAIPGYGFYYLYQ 544
            .||    ::.|.|::        .|.......:::..   |:.|..:||     ||||..|||:.
 Worm   500 CAPATSLVLFVFCVVYYHPVKYPDGKDFPFWANAFGW---FLSSCSMVV-----IPGYAIYYLFF 556

  Fly   545 STG--TFCERFKR 555
            :..  |..||.::
 Worm   557 TNKHLTLKERVRK 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13795NP_609138.3 SLC5-6-like_sbd 27..505 CDD:271356 108/532 (20%)
snf-3NP_493910.2 SLC6sbd-TauT-like 30..571 CDD:271387 126/593 (21%)

Return to query results.
Submit another query.