DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13795 and Slc6a20a

DIOPT Version :10

Sequence 1:NP_609138.3 Gene:CG13795 / 34049 FlyBaseID:FBgn0031937 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_579830.2 Gene:Slc6a20a / 113918 RGDID:621651 Length:616 Species:Rattus norvegicus


Alignment Length:662 Identity:147/662 - (22%)
Similarity:254/662 - (38%) Gaps:180/662 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GHKPFSPDLNRGK--------WDKPTDFMFACFGLALKLDVFVASFWMF------FDMGILGILP 60
            |.:| .||..|.:        |..|..|:|||...|:.|    .:.|.|      :..|.. ::|
  Rat    12 GQRP-GPDEKRARDMEKARPQWGNPLQFVFACISYAVGL----GNVWRFPYLCQMYGGGSF-LVP 70

  Fly    61 YFVYMSIYLVPIMVIHSFMGQFSSSGFISAFR-LSPFFKGMGYVSGFLTISMLIYYSIFAAVPLL 124
            |.:.:.:..:|::.:...:||....|.|.|:| :||:..|:|..|..::..:.:||::..|....
  Rat    71 YLIMLIVEGMPLLYLELAVGQRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFW 135

  Fly   125 FIINSFRPTLPWSCEGLSSWHNGSATLSSSCNKTLILEDFSEYNRSHQLLHVPSVLYFQNHYDSM 189
            ::.:||:..||||...|:|...|   ....|.|                  ..|..||       
  Rat   136 YLFHSFQDPLPWSVCPLNSNRTG---YDEECEK------------------ASSTQYF------- 172

  Fly   190 QQDAVPDWY-KDYELS----------WHFVGLFAIIWVVIAFIFYKFSETAKFGKLIRYMVIVTL 243
                   || |...:|          |.......:.|:::.....:.:|:.  ||::.:..::..
  Rat   173 -------WYRKTLNISPSIQENGGVQWEPALCLTLAWLMVYLCILRGTEST--GKVVYFTALMPY 228

  Fly   244 VLLLVCFVRFLFLPGALNGLHRYVTPKASDMA--MGVVSTFIMVLHAFGAGWGSVITLSSFNGFK 306
            .:|::..||.|.|.||.|||....|||...:|  ...::....:..:.|.|:||:|..:|:|...
  Rat   229 CVLIIYLVRGLTLHGATNGLMYMFTPKMEQLANPKAWINAATQIFFSLGLGFGSLIAFASYNEPS 293

  Fly   307 TDIMSYSWIIS--------FGQIFIYIMFGMV------------------SFMLEHYF---NELS 342
            .|...::.|:|        |..|..:.::|..                  ||.||..|   :.|.
  Rat   294 NDCQKHAVIVSVINSSTSIFASIVTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFLTASNLE 358

  Fly   343 DVDD--------------------------NGHVLSHWLLYLSSASALSTMAWPNLWTFIYYSML 381
            :|.|                          |..|....|.::....|:..|....||:.:|:.||
  Rat   359 EVKDYLASTYPNKYSEVFPHIRNCSLESELNTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFML 423

  Fly   382 LIAALIVMTTQIFTVLQSLFDEFEVLRVRKQEVTFGLIGGIALCSFYFCTNHGIIFFSALG---L 443
            |:..:..|......:|..|.|...:.....:|...||: .:..|:.      |::|....|   .
  Rat   424 LMLGMGSMLGNTAAILTPLTDSKVISSYLPKEAISGLV-CLINCAV------GMVFTMEAGNYWF 481

  Fly   444 DAIFSHSLLHLLLLLVVL-------WIYGRERFQRDIEFMLGQPFA-SWKVFILRFIAPIILV-- 498
            | ||:.....|.|||:||       ::||..||:.|:..|.|:|.. .||. :..|::|::::  
  Rat   482 D-IFNDYAATLSLLLIVLVETIAVCYVYGLRRFESDLRAMTGRPLNWYWKA-MWAFVSPLLIIGL 544

  Fly   499 -ICLLAGIALS--------------ISEHSYSTTVVFVMSIVL----VVLPILAIPGYGFYYLYQ 544
             |..|:...|:              :....|....:.|:.:::    :.:|::|:          
  Rat   545 FIFYLSDYILTGTLQYQAWDATQGQLVTKDYPPHALAVIGLLVASSTMCIPLVAL---------- 599

  Fly   545 STGTFC-ERFKR 555
              |||. .|.||
  Rat   600 --GTFIRNRLKR 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13795NP_609138.3 SLC5-6-like_sbd 27..505 CDD:271356 129/566 (23%)
Slc6a20aNP_579830.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 5/14 (36%)
SLC5-6-like_sbd 26..601 CDD:444915 136/637 (21%)

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