DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13793 and Slc6a11

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_077348.1 Gene:Slc6a11 / 79213 RGDID:628737 Length:627 Species:Rattus norvegicus


Alignment Length:585 Identity:127/585 - (21%)
Similarity:258/585 - (44%) Gaps:66/585 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RGNWEKPTDYIFACFGLALKL-DIFVASFWFFFNTGIFGMVPYLMYMVIYLVPIMVIHSYMGQFS 75
            ||:|....:::.:..|..:.| :::...:..:.|.|...::||:::.:...:|:..:.:.:|||:
  Rat    45 RGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFT 109

  Fly    76 SSGFISAF-RLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPWSCEGFKSWQND 139
            |.|.|:.: |:.|||:|:||.:..:...|.:||.|..|..:.::.|.|...|||:..|.: |..:
  Rat   110 SEGGITCWRRVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHE-WNTE 173

  Fly   140 TIAKWSICNATIAEEVAKETENDTYFYITNIHVPSVLYFKSHFESFQNDSELNDYEISWHLSGLF 204
            ...::...|.:          |.::..:.|...|.:.:::....:..:..| :...:.|.|:...
  Rat   174 KCVEFQKLNFS----------NYSHVSLQNATSPVMEFWERRVLAISDGIE-HIGNLRWELALCL 227

  Fly   205 ALVWATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVCFVRFLFLPGAHLGLKNYMTPSIEEFV- 268
            ...|....|..:|.::..  ||.:.........:||:..:|.:.||||..|:|.|:.|.:.... 
  Rat   228 LAAWTICYFCIWKGTKST--GKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSD 290

  Fly   269 ------VGTSSTFIMALQAFGAGWGSVITLSSFNGFKTN-----IMSYSWIISFGQIFI--YIMF 320
                  .||...|..|:..     |.:..|.|:|.:..|     ||  ...::.|..|:  :.:|
  Rat   291 PQVWVDAGTQIFFSYAICL-----GCLTALGSYNNYNNNCYRDCIM--LCCLNSGTSFVAGFAIF 348

  Fly   321 GMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSASALSSLGWPNLWTFIYYTMLLMAALIVITTQ 385
            .::.||.  |..|:  |:.|.......:.|::...|::.:....||..:::.||:...|......
  Rat   349 SVLGFMA--YEQGV--PIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVC 409

  Fly   386 IFTILQSLFDEFEQL--RAKKQEVTLGLIGGLAVCS----LYFCTNHGVLYFAILSIDAIFSQTL 444
            :.:::.::.|.:.::  |..::|:   ||..|::.|    |...|..|:..|.:....|.....|
  Rat   410 VESLVTAVVDMYPKVFRRGYRREL---LILALSIVSYFLGLVMLTEGGMYIFQLFDSYAASGMCL 471

  Fly   445 LHLLLL--LVVLWVYGRDRFQKDIKFMLG-QPFA----SWKVFILRFVAP---PTLVICLVLEIK 499
            |.:.:.  :.:.||||.:||..:|:.|:| :|.:    .|||     |.|   ..:.|..:::.|
  Rat   472 LFVAIFECVCIGWVYGSNRFYDNIEDMIGYRPLSLIKWCWKV-----VTPGICAGIFIFFLVKYK 531

  Fly   500 MCLEEHSYSSSVLHFMAIILVGL-PILAIPAYGFYYIHQRPGSISELFRATDWYPVEMEYRQQYG 563
            .....:.|:.....:....|:.| .:|.||.:.|..:.:..|::.|..:.......:::.|.:.|
  Rat   532 PLKYNNVYTYPAWGYGIGWLMALSSMLCIPLWIFIKLWKTEGTLPEKLQKLTVPSADLKMRGKLG 596

  Fly   564  563
              Rat   597  596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 112/510 (22%)
Slc6a11NP_077348.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
SLC6sbd_GAT3 44..585 CDD:212077 125/572 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

Return to query results.
Submit another query.