DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and slc6a1a

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001038752.2 Gene:slc6a1a / 692318 ZFINID:ZDB-GENE-060519-23 Length:679 Species:Danio rerio


Alignment Length:597 Identity:153/597 - (25%)
Similarity:261/597 - (43%) Gaps:82/597 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PDLNRGNWEKPTDYIFACFGLALKLDIFVASFWFF-----FNTGIFGMVPYLMYMVIYLVPIMVI 67
            ||  |..|....|::.:|.|.|:.|    .:.|.|     .|.|...::||.:.::...||:..:
Zfish    41 PD--RETWGGKFDFLLSCVGYAIGL----GNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFL 99

  Fly    68 HSYMGQFSSSGFISAFRLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPW-SCE 131
            ...:||::|.|.:..::|:|:|||:|..:..|:..|.|||.:..|..|.::.|||...||| ||.
Zfish   100 ECALGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIAWALYYLYNSFTTDLPWKSCN 164

  Fly   132 GFKSWQND-TIAKWSICNATIAEEVAKETENDTYFYITNIHVPSVLYFKSHFESFQNDSELNDYE 195
              ..|..| ....:||.:.|.......|      |:..|:|.             ..|......|
Zfish   165 --NPWNTDRCYTNYSIVDTTNLTSAVME------FWERNVHQ-------------MTDGLEKPGE 208

  Fly   196 ISWHLSGLFALVWATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVCFVRFLFLPGAHLGLKNYM 260
            |...|:...|:.|..:.|..:|  ..:..||.:.:.......:|.:.|:|.:.||||..|:..|:
Zfish   209 IRVPLAITLAIAWVLVYFCIWK--GVSWTGKVVYFSATYPYFMLFILFIRGVTLPGAKEGILFYI 271

  Fly   261 TPSIEEFVVGTSSTFIMALQ----AFGAGWGSVITLSSFNGFKTNIMSYSWII----SFGQIFI- 316
            ||..|:  :..|..::.|..    ::|.|.||:|.|.|:|.|..|:...|.|:    ||..:|. 
Zfish   272 TPDFEK--LKESEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYRDSIIVCCINSFTSMFAG 334

  Fly   317 YIMFGMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSASALSSLGWPNLWTFIYYTMLLMAALIV 381
            :::|.:|.|| .|.   ..:|:.:.......:.||:...|::.|....||..::::||||   :.
Zfish   335 FVIFSIVGFM-SHV---TKRPIADVAASGPGLAFLAYPEAVTQLPVSPLWAILFFSMLLM---LG 392

  Fly   382 ITTQIFTI---LQSLFDEFEQLRAKKQEVTLGLIGGLAVCSLYFC------TNHGVLYFAILSID 437
            |.:|..|:   :.:|.|||.:|..|::|:.:.     .||.:.:.      |..|:..|.:....
Zfish   393 IDSQFCTVEGFITALVDEFPRLLRKRREIFIA-----CVCVVSYAIGLSNITQGGLYVFKLFDYY 452

  Fly   438 AIFSQTLLHLLLL--LVVLWVYGRDRFQKDIKFMLG-QPFASWK---VFILRFVAPPTLVICLVL 496
            :.....||.|:..  :.:.|.||.::|..:|:.|:| :|...||   ||....|.....:...|.
Zfish   453 SASGMCLLFLVFFECISISWCYGVNKFYDNIQEMIGYKPCIWWKLCWVFFTPLVVAGVFLFSAVQ 517

  Fly   497 EIKMCLEEH---SYSSSVLHFMAIILVGLPILAIPAYGFYYIHQRPGSISELFRATDWYPVEMEY 558
            .:.:.:..:   .:...|...||:    ..::.||.|..|......|:..|..|.. ..|..::.
Zfish   518 MVPLTMNNYVFPKWGQGVGWLMAL----SSMVLIPGYMGYMFLNLKGTYKERIRIM-LQPPAVKR 577

  Fly   559 RQQYGELVQKSE 570
            .|:.|...|:|:
Zfish   578 AQENGPEQQQSQ 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 134/509 (26%)
slc6a1aNP_001038752.2 SLC5-6-like_sbd 2..588 CDD:294310 152/594 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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