DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and slc6a4a

DIOPT Version :10

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001035061.1 Gene:slc6a4a / 664719 ZFINID:ZDB-GENE-060314-1 Length:646 Species:Danio rerio


Alignment Length:600 Identity:143/600 - (23%)
Similarity:254/600 - (42%) Gaps:128/600 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SPDLNRGNWEKPTDYIFACFGLALKLDIFVASFWFF-----FNTGIFGMVPYLMYMVIYLVPIMV 66
            |.|..|..|.|..|::.:..|.|:.|    .:.|.|     .|.|...::|||:..|...||:..
Zfish    86 SLDPPRETWSKKMDFLLSVIGYAVDL----GNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFY 146

  Fly    67 IHSYMGQFSSSGFISAFR-LSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPW-- 128
            :...:|||..||.||.:: :.|:|||:|:....:.:.:..||....|..|.::|:|||.||||  
Zfish   147 MELALGQFHRSGCISIWKHVCPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRATLPWTT 211

  Fly   129 --------SCEGF------KSWQNDTIAKWSICNATIAEEVAKETENDTYFY---ITNIHVPSVL 176
                    :|..:      .||.|::|:.        |||          ||   :..:|:...|
Zfish   212 CNNRWNTPNCTHYLSTDLNVSWTNNSISP--------AEE----------FYVRQVLQVHLSPGL 258

  Fly   177 YFKSHFESFQNDSELNDYEISWHLSGLFALVWATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLV 241
            :            :|.  .:||.|:.....::..:.|..:|..:.:  ||.:.........:||:
Zfish   259 H------------QLG--WVSWQLALCLLFIFTVVYFSIWKGVKTS--GKVVWVTATFPYLVLLI 307

  Fly   242 CFVRFLFLPGAHLGLKNYMTPSIEEFVVGTSSTFI-MALQAF---GAGWGSVITLSSFNGFKTNI 302
            ..:|...||||..|:..|:.|..::.:  |::.:: .|.|.|   |.|:|.::..:|:|.|..|.
Zfish   308 LLIRGATLPGAWRGVVFYLKPDWKKLL--TTTVWLDAAAQIFFSLGPGFGVLLAFASYNPFHNNC 370

  Fly   303 MSYSWIISFGQIFIYIMFGMVSFMLEHYFLGLPKPLFET--QVINHWVLFLSSASALSSLGWPNL 365
            ...:.|.|........:.|.|.|.:..|...:.:...||  :.....:||:..|.|::::.....
Zfish   371 YKDALITSSVNCLTSFLSGFVIFTVLGYMAEMRQQGVETVAKDAGPSLLFIIYAEAIANMPAATF 435

  Fly   366 WTFIYYTMLLMAALIVITTQIFTILQSLFDEFEQLRAKKQE-VTLGLI-------------GGLA 416
            :..|::.|::|..|......:..::.::.|||..|.|:::| ..|||:             ||..
Zfish   436 FAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLARRREWFVLGLVCVCYLGALSTLTYGGAF 500

  Fly   417 VCSLY--FCTNHGVLYFAILSIDAIFSQTLLHLLLLLVVLWVYGRDRFQKDIKFMLG-QPFASWK 478
            |..|:  :.|...|:....|.:              :.|.|.||..||..|::.||| .|...|:
Zfish   501 VVKLFEEYATGPAVITVVFLEV--------------IAVSWFYGTTRFCNDVQLMLGFAPGLFWR 551

  Fly   479 V------------FILRFVA-PPTLVICLVLEIKMCLEEHSYSSSVLHFMAIILVGL-PILAIPA 529
            |            .|:.|:| ||        |:|:....:.:.::||.:    .:|: ..:.:|:
Zfish   552 VCWIAICPCFLLFIIVSFLAFPP--------EVKLFDYLYPFWTTVLGY----CIGVSSFICVPS 604

  Fly   530 YGFYYIHQRPGSISE 544
            |..|::....|:..:
Zfish   605 YMVYHLVTTKGTFQQ 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 129/539 (24%)
slc6a4aNP_001035061.1 SLC5-6-like_sbd 91..628 CDD:444915 141/594 (24%)

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