DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and Slc6a17

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001028251.1 Gene:Slc6a17 / 613226 RGDID:1587185 Length:727 Species:Rattus norvegicus


Alignment Length:622 Identity:133/622 - (21%)
Similarity:238/622 - (38%) Gaps:153/622 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NRGNWEKPTDYIFACFGLALKLDIFVASFWFF-----FNTGIFGMVPYLMYMVIYLVPIMVIHSY 70
            :|..|.....||.|..|.::.|    .:.|.|     .|.|...:||||:.::|..:|:..:...
  Rat    59 DRPAWNSKLQYILAQIGFSVGL----GNIWRFPYLCQKNGGGAYLVPYLVLLIIIGIPLFFLELA 119

  Fly    71 MGQFSSSGFISAFR-LSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPWS-CEGF 133
            :||....|.|..:. :.|...|:|:.|..:.:.:.:||.:.....:.:...||:..|||| |...
  Rat   120 VGQRIRRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFYFFKSFQYPLPWSECPVI 184

  Fly   134 KSWQNDTIAKWSICNATIAEEVAKETENDTYFYITNIHVPSVLYFKSHFESFQNDSELNDYEISW 198
            :   |.|:|        :.|...:::...|||           :::...:...:.||...  ::|
  Rat   185 R---NGTVA--------VVEPECEKSSATTYF-----------WYREALDISNSISESGG--LNW 225

  Fly   199 HLSGLFALVWATIAFIFYKFSEPA----KFGKCIRYMVIGTVALLLVCF-VRFLFLPGAHLGLKN 258
            .::....:.|:.:.....|..:.:    .|.....|:|       |.|| ||.|.|.||..|:.:
  Rat   226 KMTVCLLVAWSIVGMAVVKGIQSSGKVMYFSSLFPYVV-------LACFLVRGLLLRGAVDGILH 283

  Fly   259 YMTPSIEEFV-------VGTSSTFIMALQAFGAGWGSVITLSSFN-------------------- 296
            ..||.:::.:       ..|...|     |.|.|:|.||..||:|                    
  Rat   284 MFTPKLDKMLDPQVWREAATQVFF-----ALGLGFGGVIAFSSYNKQDNNCHFDAALVSFINFFT 343

  Fly   297 ------------GFKTNIMSYSWIISFGQ-IFIYI--------------------------MFGM 322
                        |||.|||:...::...: |..|:                          |:.:
  Rat   344 SVLATLVVFAVLGFKANIMNEKCVVENAEKILGYLNSNVLSRDLIPPHVNFSHLTTKDYSEMYNV 408

  Fly   323 VSFMLEHYF--LGLPKPLFETQ----VINHWVLFLSSASALSSLGWPNLWTFIYYTMLLMAALIV 381
            :..:.|..|  |||...|.|.:    |....:.|::...|::.......|:.:::.||:...|..
  Rat   409 IMTVKEKQFSALGLDPCLLEDELDKSVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLINLGLGS 473

  Fly   382 ITTQIFTILQSLFDEFEQLRAKKQEVTLGLIGGLAVCSLYFCTNHGVLYFAILSID--AIFSQTL 444
            :...:..|...:.|.|   :..|:..|:|.........|.|....| .||..:..|  |....|:
  Rat   474 MIGTMAGITTPIIDTF---KVPKEMFTVGCCVFAFFVGLLFVQRSG-NYFVTMFDDYSATLPLTV 534

  Fly   445 LHLLLLLVVLWVYGRDRFQKDIKFMLG-QP----FASWKVFILRFVAPPTLVICLVLE-IKMCLE 503
            :.:|..:.|.|:||..:|.:::..||| :|    |..||     ||:|..:.:..... |::.:.
  Rat   535 IVILENIAVAWIYGTKKFMQELTEMLGFRPYRFYFYMWK-----FVSPLCMAVLTTASIIQLGVS 594

  Fly   504 EHSYSSSV--------LHF----MAIILVGLPILAIP 528
            ...||:.:        |:|    ||:::..:.:..:|
  Rat   595 PPGYSAWIKEEAAERYLYFPNWAMALLITLIAVATLP 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 123/570 (22%)
Slc6a17NP_001028251.1 SLC6sbd_NTT4 60..648 CDD:271403 133/621 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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