DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and Slc6a17

DIOPT Version :10

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001028251.1 Gene:Slc6a17 / 613226 RGDID:1587185 Length:727 Species:Rattus norvegicus


Alignment Length:622 Identity:133/622 - (21%)
Similarity:238/622 - (38%) Gaps:153/622 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NRGNWEKPTDYIFACFGLALKLDIFVASFWFF-----FNTGIFGMVPYLMYMVIYLVPIMVIHSY 70
            :|..|.....||.|..|.::.|    .:.|.|     .|.|...:||||:.::|..:|:..:...
  Rat    59 DRPAWNSKLQYILAQIGFSVGL----GNIWRFPYLCQKNGGGAYLVPYLVLLIIIGIPLFFLELA 119

  Fly    71 MGQFSSSGFISAFR-LSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPWS-CEGF 133
            :||....|.|..:. :.|...|:|:.|..:.:.:.:||.:.....:.:...||:..|||| |...
  Rat   120 VGQRIRRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFYFFKSFQYPLPWSECPVI 184

  Fly   134 KSWQNDTIAKWSICNATIAEEVAKETENDTYFYITNIHVPSVLYFKSHFESFQNDSELNDYEISW 198
            :   |.|:|        :.|...:::...|||           :::...:...:.||...  ::|
  Rat   185 R---NGTVA--------VVEPECEKSSATTYF-----------WYREALDISNSISESGG--LNW 225

  Fly   199 HLSGLFALVWATIAFIFYKFSEPA----KFGKCIRYMVIGTVALLLVCF-VRFLFLPGAHLGLKN 258
            .::....:.|:.:.....|..:.:    .|.....|:|       |.|| ||.|.|.||..|:.:
  Rat   226 KMTVCLLVAWSIVGMAVVKGIQSSGKVMYFSSLFPYVV-------LACFLVRGLLLRGAVDGILH 283

  Fly   259 YMTPSIEEFV-------VGTSSTFIMALQAFGAGWGSVITLSSFN-------------------- 296
            ..||.:::.:       ..|...|     |.|.|:|.||..||:|                    
  Rat   284 MFTPKLDKMLDPQVWREAATQVFF-----ALGLGFGGVIAFSSYNKQDNNCHFDAALVSFINFFT 343

  Fly   297 ------------GFKTNIMSYSWIISFGQ-IFIYI--------------------------MFGM 322
                        |||.|||:...::...: |..|:                          |:.:
  Rat   344 SVLATLVVFAVLGFKANIMNEKCVVENAEKILGYLNSNVLSRDLIPPHVNFSHLTTKDYSEMYNV 408

  Fly   323 VSFMLEHYF--LGLPKPLFETQ----VINHWVLFLSSASALSSLGWPNLWTFIYYTMLLMAALIV 381
            :..:.|..|  |||...|.|.:    |....:.|::...|::.......|:.:::.||:...|..
  Rat   409 IMTVKEKQFSALGLDPCLLEDELDKSVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLINLGLGS 473

  Fly   382 ITTQIFTILQSLFDEFEQLRAKKQEVTLGLIGGLAVCSLYFCTNHGVLYFAILSID--AIFSQTL 444
            :...:..|...:.|.|   :..|:..|:|.........|.|....| .||..:..|  |....|:
  Rat   474 MIGTMAGITTPIIDTF---KVPKEMFTVGCCVFAFFVGLLFVQRSG-NYFVTMFDDYSATLPLTV 534

  Fly   445 LHLLLLLVVLWVYGRDRFQKDIKFMLG-QP----FASWKVFILRFVAPPTLVICLVLE-IKMCLE 503
            :.:|..:.|.|:||..:|.:::..||| :|    |..||     ||:|..:.:..... |::.:.
  Rat   535 IVILENIAVAWIYGTKKFMQELTEMLGFRPYRFYFYMWK-----FVSPLCMAVLTTASIIQLGVS 594

  Fly   504 EHSYSSSV--------LHF----MAIILVGLPILAIP 528
            ...||:.:        |:|    ||:::..:.:..:|
  Rat   595 PPGYSAWIKEEAAERYLYFPNWAMALLITLIAVATLP 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 123/570 (22%)
Slc6a17NP_001028251.1 SLC6sbd_NTT4 60..648 CDD:271403 133/621 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.

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