DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and Slc6a8

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_059044.1 Gene:Slc6a8 / 50690 RGDID:619711 Length:635 Species:Rattus norvegicus


Alignment Length:603 Identity:138/603 - (22%)
Similarity:245/603 - (40%) Gaps:123/603 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RGNWEKPTDYIFACFGLALKL-DIFVASFWFFFNTGIFGMVPYLMYMVIYLVPIMVIHSYMGQFS 75
            |..|.:..|:|.:|.|.|:.| :::...:..:.|.|...::||::..::..:||..:...:|||.
  Rat    52 RETWTRQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFM 116

  Fly    76 SSGFISAFRLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPWSCEGFKSW---- 136
            .:|.|:.:.:.|||||:||.|:.:......||.:..|....:::.||..||||:..| .:|    
  Rat   117 KAGSINVWNICPLFKGLGYASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCG-HTWNTPD 180

  Fly   137 -----QNDTIAKWSICNAT---IAEE---VAKETENDTYFYITNIHVPSVLYFKSHFESFQNDSE 190
                 :::..|..|:.|.|   :|:.   |.:..||......|.:.||..|              
  Rat   181 CVEIFRHEDCANASLANLTCDQLADRRSPVIEFWENKVLRLSTGLEVPGAL-------------- 231

  Fly   191 LNDYEISWHLSGLFALVWATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVCFVRFLFLPGAHLG 255
                  :|.::......|..:.|..:|..:..  ||.:.:.......:|:|..||.:.||||..|
  Rat   232 ------NWEVTLCLLACWVLVYFCVWKGVKST--GKIVYFTATFPYVVLVVLLVRGVLLPGALDG 288

  Fly   256 LKNYMTPSIEEFVVGTSSTFIMA----LQAFGAGWGSVITLSSFNGFKTNIMSYSWI---ISFGQ 313
            :..|:.|...:  :|:...:|.|    ..::..|.|::..|.|:|.|..|....:.|   |:.|.
  Rat   289 IIYYLKPDWSK--LGSPQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNNCYKDAIILALINSGT 351

  Fly   314 IFI--YIMFGMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSASALSSLGWPN---------LWT 367
            .|.  :::|.::.||.....:.:.|             ...|...|:.:.:|.         ||.
  Rat   352 SFFAGFVVFSILGFMATEQGVHISK-------------VAESGPGLAFIAYPRAVTLMPVAPLWA 403

  Fly   368 FIYYTMLLMAALI--------VITTQIFTILQSLFDEFEQLRAKKQEVTLGLIGGLA-VCSLYFC 423
            .:::.|||:..|.        .||..:..:..|.:..|:      :|:::.|...|. |..|...
  Rat   404 ALFFFMLLLLGLDSQFVGVEGFITGLLDLLPASYYFRFQ------REISVALCCALCFVIDLSMV 462

  Fly   424 TNHGVLYFAILSIDAIFSQTLLHLLL--LLVVLWVYGRDRFQKDIKFMLGQPFASWKVFILRFVA 486
            |:.|:..|.:....:....|||....  .:||.||||.|||..||..|:|.....|..:...|..
  Rat   463 TDGGMYVFQLFDYYSASGTTLLWQAFWECVVVAWVYGADRFMDDIACMIGYRPCPWMKWCWSFFT 527

  Fly   487 PPTLVICL------VLEIKMCLEEHSY---------------SSSV---LHFMAIILVGLPILA- 526
            |   ::|:      |:..|..:..::|               ||.:   ||.:..:|.....:| 
  Rat   528 P---LVCMGIFIFNVVYYKPLVYNNTYVYPWWGEAMGWAFALSSMLCVPLHLLGCLLRAKGTMAE 589

  Fly   527 ------IPAYGFYYIHQR 538
                  .|.:|.:::..|
  Rat   590 RWQHLTQPIWGLHHLEYR 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 125/529 (24%)
Slc6a8NP_059044.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47
SLC6sbd_CT1 52..621 CDD:271397 138/603 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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