DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and RGD1562492

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001102616.1 Gene:RGD1562492 / 499151 RGDID:1562492 Length:743 Species:Rattus norvegicus


Alignment Length:699 Identity:139/699 - (19%)
Similarity:250/699 - (35%) Gaps:211/699 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KPTDYIFACFGLALKLDIFVASFWFFFNTGIFGMVPY-----------LMYMVIYL---VPIMVI 67
            |.|:.|.    :.:...|.:.|.|.|         ||           |||:::.|   :|:|.:
  Rat    54 KKTENIL----ILVAFSIGLGSTWRF---------PYLCHQNGGGSFLLMYLILLLLLGIPLMYM 105

  Fly    68 HSYMGQFSSSGFISAFR-LSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPW-SC 130
            ...:||:.....|.|:: |.|...|:||.|:.....:::|.:...:..|.::..||....|| :|
  Rat   106 EMVIGQWLRVDNIRAWKHLVPWLSGVGYSSMLACALVILYNSALVSWSLFYLGQSFDYPTPWENC 170

  Fly   131 EGFKSWQNDTIAKWSICNATIAEEVAKETENDTYFYITNIHVPSVLYFKSHFESFQNDSELNDYE 195
            ...|::....|:             ...||...:|:   .|  :||......|            
  Rat   171 PLVKNFSTSDIS-------------CLRTEPHQFFW---YH--TVLRASDQIE------------ 205

  Fly   196 ISWHLSGLFALV-------WATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVC-FVRFLFLPGA 252
                 .|:..||       :||..|::.......|....:....|....:||.| |....|:.|.
  Rat   206 -----EGIEVLVLNVTLCLFATWFFLYITMVTRIKISVLMMIFSILFPNVLLFCFFTHIFFVKGV 265

  Fly   253 HLGLKNYMTPSIEEFVVGTSSTFIMA----LQAFGAGWGSVITLSSFNGFKTNIMSYSWIISFGQ 313
            ...||..:|..:.  ::.:...:..|    |.:.|.|.|::||.||:.....|.:.::..::...
  Rat   266 RDSLKRLVTTELS--ILASLDAWRQAGGHVLYSLGLGMGTIITFSSYQTRGENYIKWASFVAMVN 328

  Fly   314 IFIYIMFGMVSF-MLEHYFLGLPKPLFETQVINHWVLFLSSASALSSLGWP-------------- 363
            :...::...|.| ||..:......|..|:.|.|  :|.|.:...|..:.||              
  Rat   329 LMTSLLSSSVIFLMLGFWIENSGTPCVESNVSN--LLSLIANGVLPQVAWPPKDIIHRSPLEYLD 391

  Fly   364 --------------------------------------------------NLWTFIYYTMLLMAA 378
                                                              :.|..|::..|::..
  Rat   392 WISQLPKNIRNEVAHFTLPCSILVQKEKFMEGPGLAYVAFSQAITLFPGSSFWAIIFFMSLVIMG 456

  Fly   379 LIVITTQIFTILQSLFDEFEQLRAKKQEVTLGLIGGLAVCSLYFCTNHG--VLYFAILSIDAIFS 441
            |..:||.:..|..||......|....:.|.:.:..|..:.||.|.:..|  |::        :|.
  Rat   457 LGTMTTLVEGIALSLQKSISTLEKHPKLVPVIICLGGFLGSLVFSSRPGSYVVF--------LFD 513

  Fly   442 QTLLHLLLLLVV-------LWVYGRDRFQKDIKFMLGQ----PFASWKVFILRFVAPPTLVICLV 495
            ..|:.::|:::|       .||||..||:.::...||:    ||    .|:..:|..|||::.|.
  Rat   514 DHLVPMVLIMIVAFQNLSLAWVYGIKRFRAEMFGQLGRLVWAPF----TFLWSYVTLPTLLVLLT 574

  Fly   496 -----LEIKMCLEEHSYSSSV---------------LHFMAIILVGLPILAIPAYGFYYIH---- 536
                 |.....|...|:::|:               :.|::::.: |||...|...::|:.    
  Rat   575 IYFLNLYFSESLSYVSWNNSMSQEVKQPYQRIALGWVTFLSVLAL-LPIPMYPLQHWWYLDDQII 638

  Fly   537 ----QRPGSISELF----RATDW--YPV-EMEYRQQYGELVQKSEMTHQ 574
                ::|.|..:..    |.|.|  :|: ::..|.|     :||:...|
  Rat   639 CETIEKPLSSKKTVTVPKRVTQWPVHPMRKLTLRNQ-----EKSKALFQ 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 118/589 (20%)
RGD1562492NP_001102616.1 SLC5-6-like_sbd 50..621 CDD:382020 123/631 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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