DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and slc6a19b

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_956030.1 Gene:slc6a19b / 326030 ZFINID:ZDB-GENE-030131-4755 Length:651 Species:Danio rerio


Alignment Length:682 Identity:146/682 - (21%)
Similarity:262/682 - (38%) Gaps:184/682 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NRGNWEKPTDYIFACFGLALKLDIFVASFWFF------FNTGIFGMVPYLMYMVIYLVPIMVIHS 69
            :|..|:....|:..|.|..:.|    .:.|.|      ...|.| |:|:|:.:|...:|::.:..
Zfish    32 DRPKWDNKAQYMLTCVGFCVGL----GNVWRFPYLCQSHGGGAF-MIPFLILLVFEGIPLLHLEF 91

  Fly    70 YMGQFSSSGFISAFR-LSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPWSCEGF 133
            .:||....|.:..:| ::|...|:|..|:.::..:.:||....|..:.:..|||:..||||    
Zfish    92 AIGQRLRKGSVGVWRTINPYMLGVGIASMCVSFLVSLYYNTIIAWVMWYFFNSFQDPLPWS---- 152

  Fly   134 KSWQNDTIAKWSICNATIAE-------EVAKETENDTYFYITNIHVPSVLYFKSHFESFQNDSEL 191
                          ...|.|       |..|.:..|.::|...::..:.:            .:.
Zfish   153 --------------QCPINENRTGPIPECGKSSPVDYFWYRETLNTSAAI------------DDT 191

  Fly   192 NDYEISWHLSGLFALVWATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVCF-VRFLFLPGAHLG 255
            ...:: |.:..|.: .||.:.....:..|..  ||.: |:......|:|..| :|.|.|.|:..|
Zfish   192 GGLQV-WMVLCLIS-AWAVLYVCCIRGIETT--GKAV-YVTSTLPYLVLTIFLIRGLTLKGSVDG 251

  Fly   256 LKNYMTPSIEEFVVGTSSTFIMA----LQAFGAGWGSVITLSSFNGFKTNIMSYSWIISFGQIF- 315
            :|...||.|.|  :...||::.|    ..:|...:|.:|:.||:|....|....:.|||....| 
Zfish   252 IKFLFTPDINE--LANPSTWLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEQDAVIISVINAFT 314

  Fly   316 -IY---IMFGMVSFMLEHYF--------------LGLPKPL------------------------ 338
             ||   :::.::.|.....|              ..||:..                        
Zfish   315 SIYAATVIYSIIGFRATERFDDCMNGNILTLLNTFDLPEGFINQSNYQDVFQSLNSTSPDIISSL 379

  Fly   339 -FETQVINHW---------VLFLSSASALSSLGWPNLWTFIYYTMLLMAALIVITTQIFTILQSL 393
             .:|..:|::         :.|:....|::.:....||:.:::.||....           |.|:
Zfish   380 SLKTCDLNNFLSEGVEGTGLAFIVFTEAITKMPLSPLWSVLFFIMLFCLG-----------LSSM 433

  Fly   394 FDEFEQLRAKKQEVTLG---------LIGGLA--VC---SLYFCTNHGVLYFAILSIDAIFSQTL 444
            |...|.:....|:  ||         :|.|:.  ||   .|.|....|..:.|:..   .|:.::
Zfish   434 FGNIEGVLVPLQD--LGVFPKSWPKEIISGVTCLVCCLVGLIFVQGSGNYWLALFD---SFAGSI 493

  Fly   445 LHLLL----LLVVLWVYGRDRFQKDIKFMLG-QPFASWKVFILRFVAPPTLVICLVLEIKMCL-E 503
            ..|::    ::.|::|||.|||.:|:.||:| :|...|:. ..||::|..::...|......: :
Zfish   494 PLLIIAFSEMIGVVYVYGIDRFNEDLIFMIGHKPNIFWQA-TWRFISPLIMLAIFVFYFSTTVTK 557

  Fly   504 EHSYSS-----------------SVLHFMAIILVGLPILAIP------AYGFYYIHQRP-GSISE 544
            |..||:                 :.::.:..:|.|:|.||:|      |...|...:.| .||.:
Zfish   558 EIFYSAWDPESENFPTLEKKPYPTWIYVIIFLLAGVPSLAVPGTAVFRAIRDYCCKKHPSASIQQ 622

  Fly   545 LFRATDWYPVEMEYRQQYGELV--QKSEMTHQ 574
            |...:  |.|:|     :.|.|  ||:|...|
Zfish   623 LDSVS--YKVQM-----HDEEVKTQKTEKFDQ 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 120/569 (21%)
slc6a19bNP_956030.1 SLC6sbd_B0AT1 33..613 CDD:212085 133/638 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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