DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and Slc6a1

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_848818.1 Gene:Slc6a1 / 232333 MGIID:95627 Length:599 Species:Mus musculus


Alignment Length:599 Identity:150/599 - (25%)
Similarity:264/599 - (44%) Gaps:101/599 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PDLNRGNWEKPTDYIFACFGLALKLDIFVASFWFF-----FNTGIFGMVPYLMYMVIYLVPIMVI 67
            ||  |..|:...|::.:|.|.|:.|    .:.|.|     .|.|...::||.:.::...||:.::
Mouse    42 PD--RDTWKGRFDFLMSCVGYAIGL----GNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLL 100

  Fly    68 HSYMGQFSSSGFISAFRLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPW-SCE 131
            ...:||::|.|.:..::|:|:|||:|..:..|:..|.|||.:..:..:.::.|||..|||| .|:
Mouse   101 ECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCD 165

  Fly   132 GFKSWQND-TIAKWSICNATIAEEVAKETENDTYFYITNIHVPSVLYFKSHFESFQNDSELNDYE 195
              ..|..| ..:.:|:.|.|.......|      |:..|:|.             ..|......:
Mouse   166 --NPWNTDRCFSNYSLVNTTNMTSAVVE------FWERNMHQ-------------MTDGLDKPGQ 209

  Fly   196 ISWHLSGLFALVWATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVCFVRFLFLPGAHLGLKNYM 260
            |.|.|:...|:.|..:.|..:|  .....||.:.:.......:|::.|.|.:.||||..|:..|:
Mouse   210 IRWPLAITLAIAWVLVYFCIWK--GVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEGILFYI 272

  Fly   261 TPSIEEFVVGTSSTFIMALQ----AFGAGWGSVITLSSFNGFKTNIMSYSWII----SFGQIFI- 316
            ||:..:  :..|..::.|..    ::|.|.||:|.|.|:|.|..|:...|.|:    |...:|. 
Mouse   273 TPNFRK--LSDSEVWLDAATQIFFSYGLGLGSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAG 335

  Fly   317 YIMFGMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSASALSSLGWPNLWTFIYYTMLLMAALIV 381
            :::|.:|.|| .|.   ..:.:.:.......:.||:...|::.|....||..::::||||   :.
Mouse   336 FVIFSIVGFM-AHV---TKRSIADVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLM---LG 393

  Fly   382 ITTQIFTI---LQSLFDEFEQLRAKKQEVTLGLIGGLAVCSLYF------CTNHGVLYFAILSID 437
            |.:|..|:   :.:|.||:.:|...::|:.:.     |||.:.:      .|..|:..|.:....
Mouse   394 IDSQFCTVEGFITALVDEYPRLLRNRRELFIA-----AVCIVSYLIGLSNITQGGIYVFKLFDYY 453

  Fly   438 AIFSQTLLHLLLL--LVVLWVYGRDRFQKDIKFMLG-QPFASWKVFILRFVAPPTLV--ICLVLE 497
            :....:||.|:..  :.:.|.||.:||..:|:.|:| :|...||:....|.  |.:|  :.|...
Mouse   454 SASGMSLLFLVFFECVSISWFYGVNRFYDNIQEMVGSRPCIWWKLCWSFFT--PIIVAGVFLFSA 516

  Fly   498 IKMC-LEEHSY-----SSSVLHFMAIILVGLPILAIPAYGFYYIHQRPGSISELFRATDWYPVEM 556
            ::|. |...||     ...|...||:    ..::.||.|..|......||:              
Mouse   517 VQMTPLTMGSYVFPKWGQGVGWLMAL----SSMVLIPGYMAYMFLTLKGSL-------------- 563

  Fly   557 EYRQQYGELVQKSE 570
              :|:...::|.||
Mouse   564 --KQRLQVMIQPSE 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 129/508 (25%)
Slc6a1NP_848818.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
SLC6sbd_GAT1 2..599 CDD:212075 150/599 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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