DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and snf-11

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_505873.2 Gene:snf-11 / 191770 WormBaseID:WBGene00004910 Length:610 Species:Caenorhabditis elegans


Alignment Length:602 Identity:144/602 - (23%)
Similarity:254/602 - (42%) Gaps:102/602 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RGNWEKPTDYIFACFGLALKL-DIFVASFWFFFNTGIFGMVPYLMYMVIYLVPIMVIHSYMGQFS 75
            |..|....|:|.:|.|.|:.| :::...:..:.|.|...::||.:.:|....|:.::.:..||..
 Worm    10 REQWSSWADFIMSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVFCGAPLFILETSWGQLM 74

  Fly    76 SSGFISAFRLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPT-LPW-SCEGFKSW-- 136
            |.|.:..|::.|:|||:|..:..:...|.|||.:..:....::.|||..: :|| :|:  .:|  
 Worm    75 SVGGLGMFKICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLYNSFTMSDVPWKNCD--HAWNT 137

  Fly   137 -------------QNDTIAK--------------------------WSICNATIAEEVA--KETE 160
                         .|.|||:                          |::|:|.....|:  ||..
 Worm   138 PNCRSEYVKIPCDSNRTIAEFFNVKVLTHDHIHEYKKQFFVGEKMNWTVCSAADLSVVSPVKEFW 202

  Fly   161 NDTYFYITNIHVPSVLYFKSHFESFQNDSELNDYEISWHLSGLFALVWATIAFIFYKFSEPAKFG 225
            |.           .||...|..|        |...|.|.|:....|||.......:|   ..|:.
 Worm   203 NH-----------RVLGISSGLE--------NPGGIRWDLALFLLLVWIICYLCIFK---GVKWT 245

  Fly   226 KCIRYMVIGTVALLLVC-FVRFLFLPGAHLGLKNYMTPSIEEFVVGTSSTFIMALQ----AFGAG 285
            ..:.|:......::|.| .:|.|.|.||.:||:.|:.|...:.:  .|..::.|:.    ::|.|
 Worm   246 GKVVYITASFPYMMLFCLLIRGLTLEGAGVGLEFYLKPDFSKLL--ESKVWVDAVTQVFFSYGLG 308

  Fly   286 WGSVITLSSFNGFKTNIMSYSWIISF----GQIFI-YIMFGMVSFMLEHYFLGLPKPLFETQVIN 345
            .|:::.|.|:|.|..|:...:..:.|    ..:|. :::|..:.||....    .|.:.|.....
 Worm   309 LGALVALGSYNKFNNNVYKQALTVCFVNSGTSVFAGFVIFSFIGFMATQQ----EKSVAEVAQAG 369

  Fly   346 HWVLFLSSASALSSLGWPNLWTFIYYTMLLMAALIVITTQIFTI---LQSLFDEFEQLRAKK--Q 405
            ..:|||:..|.:..|.:...|:.:::.|:|   .:.:.:|..|:   ..::.|||.|:|.||  :
 Worm   370 PGLLFLAYPSGILQLPYTQFWSCLFFLMVL---FLGVDSQFCTMEGFFTAIIDEFPQIRRKKYGR 431

  Fly   406 EVTLGLIGGLA-VCSLYFCTNHGVLYFAILSIDAIFSQTLLHLLLL--LVVLWVYGRDRFQKDIK 467
            |:.:|:|..:: :..|...|..|...|.:....|.....||.||..  :.:.|..|.||:.:.:|
 Worm   432 EIFVGVICVISYLIGLTTVTEGGFYVFQLFDFYAASGWALLWLLFFECIAISWSLGIDRWYEHMK 496

  Fly   468 FMLG-QPFASWK---VFILRFVAPPTLVICLVLEIKMCLEEHSYSSSVL-HFMAIILVGLPILAI 527
            .|:| .|.|.||   ||....|....|:..|:....:.::.::|...|. |.....|....:|.|
 Worm   497 SMIGYYPSAWWKFCWVFATPSVCFGVLLFGLIKYQPLRIDAYNYDYPVWGHIFGWFLSLSSMLCI 561

  Fly   528 PAYGFYYIHQRPGSISE 544
            |.|..:...:.||::.|
 Worm   562 PGYAIWIWFKTPGTVQE 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 131/546 (24%)
snf-11NP_505873.2 SLC6sbd-TauT-like 10..586 CDD:271387 144/602 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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