DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13793 and snf-10

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_505682.2 Gene:snf-10 / 191769 WormBaseID:WBGene00004909 Length:673 Species:Caenorhabditis elegans


Alignment Length:619 Identity:146/619 - (23%)
Similarity:251/619 - (40%) Gaps:115/619 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 WEKPTDYI--FACFGLALKLDIFVASFWFF-FNTGIF-GMVPY---LMYMVIYLVPIMVIHSYMG 72
            ||..|..:  ..|.|          :.||| :..|.: |..||   ..|:.| .||::.:.:.:|
 Worm    84 WEAITATLSFVTCSG----------NIWFFPYLCGYYGGWFPYQFTFCYVFI-AVPLLYLETALG 137

  Fly    73 QFSSSGFISAF-RLSP----LFKGMGYVSLFLTITLLIY----YTIFAAVPLLFVLNSFRPTLPW 128
            |::|:..:|.| |::|    |..||.::.:|.||:|.::    .|||.     ....|...|.||
 Worm   138 QYASASPLSVFSRMAPAMAGLSAGMCFIMVFRTISLSVWAIYDLTIFT-----HASQSIWSTSPW 197

  Fly   129 -SCEGFKSWQNDTIAKWSICNATIAEEVAKETENDTYFYITNIHVPSVLYFKSHFESF------Q 186
             ||:  :|...|....:.:.:.....:...:.|.|.|..:. |........||.|.||      :
 Worm   198 ESCQ--ESQSGDYCVNYKLSSKCTWIQPGSDKECDEYQEML-IATRGFQQRKSPFMSFVHGLMYK 259

  Fly   187 NDSELNDYEISWHLSGLFAL-VWATIAFIFYKFSEPAKFGK----CIRYMVIGTVALLLV----- 241
            ....:||:|.....|.:.|: :|..|..|....|:  ..|:    .:..:::||:.||..     
 Worm   260 RSITMNDWEPPSVTSIICAVCLWIIIGIISIGGSK--VLGRTGIVALTLLLVGTIMLLSYGMSLN 322

  Fly   242 ----CFVRFLFLPGAHLGLKNYMTPSIEE---FVVGTSSTFIMALQAFGAGWGSVITLSSFNGFK 299
                .|..|.           |.:...|:   :|...:.....||:|...|.|.:...:|.|.|.
 Worm   323 DTTNVFTAFF-----------YQSEGYEDKWMWVWSWADAAAHALRALNVGCGGIQKFASLNNFH 376

  Fly   300 TNIMSYSWIISFGQIFIYIMFGMVSFML-----EHYFLGLPK----PLFETQVINHWVLFLSSAS 355
            ..|.....:||......||..|::|||.     ..|:..|..    .|:.|.|:...|  :|...
 Worm   377 NKIHRDVLLISIVSFVFYICTGLLSFMFMAEIGRLYYPDLEASERIQLYATPVMIESV--ISEIL 439

  Fly   356 ALSSLGWPNLWTFIYYTMLLMAALIVITTQIFTILQSLFDEFEQLRAK---------KQEVTLGL 411
            ..||:|  ::|.|:::..|...::..|::.|:.|...:.:.....|.|         |:.:.|.:
 Worm   440 TNSSMG--SIWVFLFWLTLAACSIQGISSYIWVISSMIVERLNGSRRKYGKALASWHKRAIILAI 502

  Fly   412 --IGGLAVCSLYFCTNHGVLYFAILSIDAIFSQTLLHLLLLLVVLWVYGRDRFQKDIKFML---G 471
              :.|| :.||.|..|.|:...:.:...|.:....:..:.::.|.:|||..||..:|:.|:   |
 Worm   503 MSVTGL-ISSLPFLGNGGINLMSSIETFASYGTIFIAFVEVITVSYVYGFKRFSVNIRAMIGGHG 566

  Fly   472 QPFASWKVFILRFVAPPTLVI----CLVLEI--KMCLEEHSYSSSVLHFMAIILVGLPILAIPAY 530
            .|...|  ::...|..|.|:|    |:|...  |....|:|..|..:.:..::   :|.:.:..|
 Worm   567 PPNVFW--WLNWLVISPILLIVTFGCIVATFGQKKAFNENSIVSDPIGYSLLV---MPCIFVILY 626

  Fly   531 GFYYIHQRPGSISE---LFRAT-DWYPVEMEYRQ 560
            .....:.|..::..   :.||| ||.|:..|.|:
 Worm   627 FLRDEYDRRKNMEPFVVMIRATGDWGPMNPEDRR 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 129/545 (24%)
snf-10NP_505682.2 SNF 78..628 CDD:264495 137/585 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.