DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and snf-6

DIOPT Version :10

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001367976.1 Gene:snf-6 / 191768 WormBaseID:WBGene00004905 Length:714 Species:Caenorhabditis elegans


Alignment Length:601 Identity:155/601 - (25%)
Similarity:283/601 - (47%) Gaps:78/601 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RGNWEKPTDYIFACFGLALKLDIFVASFW-----FFFNTGIFGMVPYLMYMVIYLVPIMVIHSYM 71
            ||||...:||:.|..|....    |.|||     .|.:.|...:||||..:.:..:|:..:...:
 Worm    64 RGNWSNKSDYLLAVIGFTAG----VGSFWKFPFLVFQHGGAAFLVPYLCMLCLASLPMFFMEMVL 124

  Fly    72 GQFSSSGFISAFRLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPWS-CEGFKS 135
            ||||||..||.:::.|||||:|:..:.::....:::.|.:|..|.:::|||..::||| |....|
 Worm   125 GQFSSSAAISVWKVVPLFKGIGFAQVTISGFFAVFFNIISAWTLFYLINSFSFSIPWSNCANSWS 189

  Fly   136 WQNDTIAKWSIC---NATIAEE----VAKETENDTYFYITNIH----VPSVLYFKSHFESFQNDS 189
            .:|.|:.....|   |.|:...    |...:.|:|  .:..:|    :||:.||  |.:......
 Worm   190 GENCTLGTRIQCKEMNGTLLVNGSCIVEHASSNET--TVIPLHDLGSIPSLKYF--HNDVLMLSK 250

  Fly   190 ELNDY-EISWHLSGLFALV-WATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVCFVRFLFLPGA 252
            .::|: .::|:| ||..|. |  ||.....|......||.:...||....:|.|...|.|.|.|:
 Worm   251 GVDDFGTLNWYL-GLCVLACW--IAVFLCLFQGVKSSGKVVYVAVIVPFIILTVLLTRLLTLDGS 312

  Fly   253 HLGLKNYMTPS----IEEFVVGTSSTFIMALQAF---GAGWGSVITLSSFNGFKTNIMSYSWIIS 310
            ...:..::||.    ::..|.|.:     |:|||   ....|.:.|::|::.|..||....|::.
 Worm   313 LAAVFYFLTPKWEILMDLHVWGEA-----AVQAFYSVSCCSGGLFTIASYSRFHNNIYKDIWLVL 372

  Fly   311 FGQIFIYIM-----FGMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSASALSSLGWPNLWTFIY 370
            ...:.:.::     |..:.|....:.:.|.|  |..:...| ::|:..|.||:.:....|:..::
 Worm   373 IVDVIVSLVGCLLTFSAIGFTCYEFAISLDK--FHIRDGFH-LVFVFLAEALAGVSVAPLYAGLF 434

  Fly   371 YTMLLMAALIVITTQIF---TILQSLFDEF-EQLRAKKQEVTLGLIGGLAVCSLYFCTNHGVLYF 431
            :.|:|   |:|..||:|   ||:.|:.||: |:||..::.|...:.....:.|:.||.:.|:.:.
 Worm   435 FIMIL---LVVHATQMFVVETIVSSICDEYPERLRRNRRHVLTTVCALFILLSIPFCLSSGLFWM 496

  Fly   432 AILSIDAIFSQTLLHLLLL--LVVLWVYGRDRFQKDIKFMLG--QP-FASWKVFILRFVAPPTLV 491
            .:|: ..:.:..|:.:..|  :.:.||||.|....:.|:::|  .| :..||: :.:|:.|   :
 Worm   497 ELLT-QFVLTWPLVVIAFLECMAINWVYGVDNMLDNAKWIVGYWPPCYIFWKI-LFKFICP---M 556

  Fly   492 ICLVLEIKMCLEEHS--YSSSVLHFMAII----LVGLPILAIPAYGFYYIHQRPGSISE-----L 545
            :.|.:...:.|:.:|  |.|....:.:|:    :...|::.||..|.:......|:|::     |
 Worm   557 VYLAILCFLWLDWNSIQYESYQFPYWSILTAWCIASFPLILIPIVGIWQFCIAKGTITQKWWRVL 621

  Fly   546 FRATDWYPVEMEYRQQ 561
            :....|.|....:|.:
 Worm   622 YPDDAWGPAMAIHRAE 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 136/518 (26%)
snf-6NP_001367976.1 SLC5-6-like_sbd 64..639 CDD:444915 155/601 (26%)

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