DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and snf-12

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_509527.1 Gene:snf-12 / 181143 WormBaseID:WBGene00004911 Length:1022 Species:Caenorhabditis elegans


Alignment Length:615 Identity:145/615 - (23%)
Similarity:246/615 - (40%) Gaps:107/615 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 WEKPTDYIFACFGLALKLD---IFVASFWFFFNTGIFGMVPYLMYMVIYLVPIMVIHSYMGQFSS 76
            |....|:..:|.|..:.:.   .|.|.. :....|:| .:|||..::.:.:|::.:|..:||::.
 Worm   160 WRTQKDFFLSCLGFMVGVGHTMRFPAKV-YQHGGGVF-FIPYLFSLIFFGLPLVFLHLSLGQYTG 222

  Fly    77 SGFISAF-RLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFR-----PTLPW-SCEGFK 134
            ....:|| ||.|:..|:|:..:.:.|.:.:||.|..|..:.:...|.:     ..||| :|.  .
 Worm   223 QAANTAFQRLMPIGSGVGWALVVIAIPVAVYYNIIVAWAIHYFFQSAKGLLLGDELPWETCR--D 285

  Fly   135 SWQNDTIAKWSICNATIAEEVAKETEN-DTYFYITNIHVPSVLYFKSHFESFQNDSELNDYEISW 198
            .||.|.    ..||          ..| .:.|..||.......:|.|...|.....:.....:..
 Worm   286 EWQLDN----RCCN----------LHNLHSCFNSTNSITAPEAFFHSEVLSLSTFGDFALGPLQS 336

  Fly   199 HLSGLFALVWATIAFIFYKFSEPAKFGKCIRYM-VIGTVALLL--VCFVRFLFLPGAHLGLKNYM 260
            ||....|..|..:.|..:|     ..|...:.| |..||..||  :..:|.:.||||:.||    
 Worm   337 HLVLSLAAAWLLVFFGVFK-----GLGSIAQTMNVTATVPYLLLSILLLRGISLPGANKGL---- 392

  Fly   261 TPSIEEFVVGTSSTFI--------MALQAF---GAGWGSVITLSSFNGFKTNIMSYSWIISFGQI 314
                 .|:....||.:        .|.|.|   |...|.:|::::|:.::.||...|.::.....
 Worm   393 -----TFLFTVDSTKLWKWQIWKSAAEQVFYELGIDAGPLISMAAFSRYRNNIYRDSVLLVIMDA 452

  Fly   315 FIYIMFGMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSA---SALSSLGWPNLWTFIYYTMLLM 376
            ....:.|||.|.... |:..........|:.|..|:||..   ...|.:.|..||..:::.||::
 Worm   453 LTSCLSGMVIFSFVG-FIASESNSNVNDVLKHDPLYLSFTVYPGVTSFMYWGGLWATLFFGMLVL 516

  Fly   377 AALIVITTQIFTILQSLFDEFEQLRAKKQEVTLGLIGGLAVCSLY----FCTNHGVLYF-AILSI 436
            ||:......:..|..:..:.|..   |.:.|...|:..|.:...:    .|...|:..| ||.::
 Worm   517 AAIDAEFAWLEMIASAFMNHFSM---KNKAVENRLLAFLCLAGFFLGLPLCAQGGIFVFHAIENL 578

  Fly   437 DAIFSQTLLHLLLLLVVLWVYGRDRFQKDIKFMLGQP-----------------FASWKVFI--- 481
            :|.::...|.||.:.:|.:|||.|.:..||..||..|                 |....::|   
 Worm   579 NANWNSFSLALLSVAIVCYVYGIDNYLTDISAMLRVPRIQISKATRLKEKLIYFFGPGGIYIKFS 643

  Fly   482 LRFVAPPTLVICLVLEIKMCLEEHSYSSSVL----HFMA-IILVGLPILAIPAYGFYYIHQ--RP 539
            |.|:.|..|.:.||..: :..:..|::...:    ..:| |:::| |:|.:|...|..|.|  ..
 Worm   644 LCFICPVILTVLLVASV-LGYQRISFAGRPIPIDYEIVAWIVMIG-PLLVVPLVAFMQIRQIRNE 706

  Fly   540 GS-ISELFRATDW--------YPVEMEYRQ 560
            |. :..||..::|        .|.::..||
 Worm   707 GKLLKSLFDTSEWRESQDDSLEPKDLYMRQ 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 127/531 (24%)
snf-12NP_509527.1 SLC6sbd 158..660 CDD:271359 128/535 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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