DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and snf-9

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_503077.2 Gene:snf-9 / 178512 WormBaseID:WBGene00004908 Length:713 Species:Caenorhabditis elegans


Alignment Length:642 Identity:134/642 - (20%)
Similarity:253/642 - (39%) Gaps:129/642 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RGNWEKPTDYIFACFGLALKLDIFVASFWFF-----FNTGIFGMVPYLMYMVIYLVPIMVIHSYM 71
            ||.|....:::.:..|:|:.|    .:.|.|     .|.|...:|||:...:::.:|.:.:...:
 Worm    51 RGAWGNQIEFLLSTLGMAVGL----GNIWRFPTRAYNNGGSAFLVPYVACALLFGLPAVYLEFLL 111

  Fly    72 GQFSSSGFISAF-RLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLN-SFRPTLPWS----- 129
            ||:..:.....| |.:|:.:|:|::::.::..:.|||.|......:::.: ....|..|:     
 Worm   112 GQYHRTTAPIIFRRFAPILQGVGWMAVAVSSLVAIYYIIIIGWSTVYMASIVMGHTSKWNRCGNS 176

  Fly   130 ---------------CEGFKSWQNDTIAKWSICNATIAEEVAKETENDTYFYI------------ 167
                           |..|.:..|:|...|:        .::.|.....|.|:            
 Worm   177 WNNAESCVDSGLQPLCASFNATGNETSPVWA--------NLSSEGRGKFYIYLNTSCYDKVDLEF 233

  Fly   168 --TNIHVPSVLYFKSHF----ESFQNDSELNDYEISWHLSGLFAL--VWATIAFIFYKFSEPAKF 224
              |.:...:..||..:.    :.|...|.:|       ....|.:  .|..:..|.:|  .....
 Worm   234 NKTKMIAATEQYFFDYVVKPTDGFLEFSSIN-------FKSFFGMNACWLIVVLILWK--GVGYM 289

  Fly   225 GKCIRYMVIGTVALLLVCFVRFLFLPGAHLGLKNYM-TPSIEEFVVGTSSTFIMALQ----AFGA 284
            ||....:|.....::::.|.|.:.|.||..|:..|: .|...:  |...:|:..||:    :.|.
 Worm   290 GKASYVIVTLPYFIIILLFFRGITLDGAEDGIYYYLGNPDWSK--VFMPATWGEALKQLCFSLGI 352

  Fly   285 GWGSVITLSSFNGFKTNIMSYSWIISFGQIFIYIMFGMVSFMLEHYFLGLPKPLFETQVINHW-- 347
            |:|.:|.::||:....|....:.|:..|...:.::.|...|.... ||...|.....:|:|..  
 Worm   353 GYGGLIGMASFSKPNNNCFRDALIVIIGDTMMSLVGGAAVFSTLG-FLAKKKGCSVAEVVNDGFS 416

  Fly   348 VLFLSSASALSSLGWPNLWTFIYYTMLLMAALIVITTQIFTILQSLFDEFEQLRAKKQEVTLGLI 412
            :.|::...||..:..|.||:|:::.||....:......:.....|:.|:|..||.:|..|.:...
 Worm   417 LAFVAFPEALGRMPLPELWSFLFFLMLFFLGISTEVAYVNVFCSSICDQFVNLRKRKWLVAVLWC 481

  Fly   413 GGLAVCSLYFCTNHGVLYF--------AILSIDAIFSQTLLHLLLLLVVLWVYGRDRFQKDIKFM 469
            ..|.|..:...|:.|..:|        .:.|..|:.::       :|:|.:||||.....|:|.|
 Worm   482 LVLYVLGVVMVTDGGFYWFIMFDEYAAGVSSCCAVTAE-------VLIVAYVYGRRNQLADMKEM 539

  Fly   470 LGQ---PFASW-------KVFILRFVAPPTLVICLVLEIKMCLEEHSYSSSV----LHFMAIILV 520
            .|:   ...||       ..|...||.|   |:..:|.:...:.::.|.:..    ::.:|..:|
 Worm   540 FGESKNKCTSWIGQHSPYFGFNWMFVTP---VLGSILIVLASIRQYPYQTDENKPNMYPLAFDIV 601

  Fly   521 G-----LPILAIPAYGF--YYIHQRPG-SISELFRATDWYPVEMEYRQ--QYGELVQ 567
            |     ||:..:|.:.|  :...:|.| .:..||         |:.||  .:|.:.|
 Worm   602 GWAVCLLPMALVPIFAFCAFVEFKRKGHDLRALF---------MKQRQLKSFGRIYQ 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 114/550 (21%)
snf-9NP_503077.2 SLC6sbd 52..577 CDD:271359 116/558 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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