DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13793 and snf-7

DIOPT Version :10

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_499702.2 Gene:snf-7 / 176723 WormBaseID:WBGene00004906 Length:705 Species:Caenorhabditis elegans


Alignment Length:634 Identity:129/634 - (20%)
Similarity:252/634 - (39%) Gaps:133/634 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VASFWFF-----FNTGIFGMVPYLMYMVIYLVPIMVIHSYMGQFSSSGFISAF-RLSPLFKGMGY 94
            :.:.|.|     .|.|:..::.|::..:::.||.:.:...:||:::....:|| |:.|:.:|:|:
 Worm    85 LGNIWRFPTTAYKNGGLSFLIAYVVCGILFAVPAIHMEFALGQYAAKSPPAAFRRMMPILEGVGW 149

  Fly    95 VSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPWSCEGFKSWQNDTIAKWSICNATIAEEVAKET 159
            ::..:...:.:||.|..:..:|::.|....|....|      .||    |:...:||..|..|:.
 Worm   150 MTCLVGAIIGVYYMIVISWIVLYLFNIIYATKISKC------NND----WNKNRSTICYEGVKQK 204

  Fly   160 ENDTY-----FYITN------IHVPSVLYFKSHFESFQN------------------DSELNDY- 194
            ....|     ..:||      :| ..::|.....::..|                  .:...|: 
 Worm   205 LCSGYMLNSSLVMTNLTRNASVH-SKMMYIDGKCQNATNMKLAVGTEQFFTNFVVKPSTGFTDFN 268

  Fly   195 EISWHLSGLFALVWATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVCFVRFLFLPGAHLGLKNY 259
            .|:..:....|:.| .||.|.......| .||...|.|:...|:::...:|.|.|.||..||...
 Worm   269 SINVPMLAAVAVCW-VIAIISLIRGMKA-IGKLSYYTVLLPYAIIIALMIRGLTLEGASTGLHFL 331

  Fly   260 MTPSIEEF----VVG--TSSTFIMALQ----AFGAGWGSVITLSSFNGFKTNIMSYSWIISFGQI 314
            ......|:    ..|  ....:|.||.    :...|.|.::.:.|:|. ||    |:|   :...
 Worm   332 FWGKPNEYGHYDFAGLYDPDVWIAALMQMCFSLSIGQGGLMNIGSYNK-KT----YNW---YRDA 388

  Fly   315 FIYIM-------------FGMVSFMLEHYFLGLPKPLFETQVI--NHWVLFLSSASALSSLGWPN 364
            ::.::             |..:.|:.|...:.:..|....:|:  .|.:.|:....|::.:.:|.
 Worm   389 YLVVLCDTLMSLLGGTAVFSTLGFLAEQRNISISNPKGFNEVVQEGHALAFIVYTEAIAQMPYPF 453

  Fly   365 LWTFIYYTMLLMAALIVITTQIF---TILQSLFDEFEQLRAKKQEVTLGLIGGLAVCSLYFCTNH 426
            ||..:::.||.   |:.|:|:|.   |:...|.|.|..||..:....:.:.....:..|...::.
 Worm   454 LWYALFFVMLF---LLGISTEIVIIETVCSCLADRFHYLRQHRWITVVTVSTTFFLLGLVMTSDA 515

  Fly   427 GVLYFAIL-SIDAIFSQTLLHLLLLLVVLWVYGRDRFQKDIKFMLGQPFAS-----------WKV 479
            |..:|.:. ...|..|.|:...::.|.|.|.||.|.|:.||:.|..:|.:.           |.:
 Worm   516 GFYWFDLYDEYSAGVSATIGTAIMCLTVCWCYGLDNFRADIREMWEEPESRLDKYLGPGAYVWTI 580

  Fly   480 FILRFVAPPTLVICLVLEIKMCLEEHS------------------YSSSVLHFMAIILVGLPI-- 524
             :.|||.|   :.|||:......::..                  :.:::..|:..:..|..|  
 Worm   581 -VWRFVTP---ICCLVIMFAWIWDKKYPFKGDSKKYPPVFDAFGWFVAALPFFVVPVFAGFAIKR 641

  Fly   525 ---LAIPAYGFYYIHQRPGSISELFRATDWYPVEMEYRQQYGELVQKSE 570
               |.||..|.:.:.::..:..   |.::.:|   |::|:.|:.:.:.|
 Worm   642 FKDLNIPIRGVFMVQKQHPAYD---RISEKWP---EWKQKIGDKLPELE 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 116/537 (22%)
snf-7NP_499702.2 SLC6sbd 70..598 CDD:271359 116/540 (21%)

Return to query results.
Submit another query.