DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and snf-5

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_496735.1 Gene:snf-5 / 174923 WormBaseID:WBGene00004904 Length:728 Species:Caenorhabditis elegans


Alignment Length:635 Identity:132/635 - (20%)
Similarity:239/635 - (37%) Gaps:147/635 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PFSPDLNRGNWEKPTDYIFACFGLALKLDIFVASFWFF-----FNTGIFGMVPYLMYMVIYLVPI 64
            |...:..|..:....:::....|||:.|    .:.|.|     .|.|...::|||....::.:|.
 Worm    75 PEEEEEKRDGFGNSFEFVLTSLGLAVGL----GNIWRFPTRAYNNGGSAFLIPYLTCAFLFGLPA 135

  Fly    65 MVIHSYMGQFSSSGFISAF-RLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPW 128
            :......||:........| |:.|:.:|:|::.:|:...:.|||.:..:...::::|        
 Worm   136 VYFEFLTGQYQGKSPPVIFRRVRPILEGVGWMGVFVAALVAIYYIVIVSWISIYMIN-------- 192

  Fly   129 SCEGFKSWQNDTIAKWSICN---------ATIAEEV-----AKETENDTYFYITNIHVP-SVLYF 178
            .|.|.       .|.||.||         .|:|::.     .|...|.| .:.:::.:| .::||
 Worm   193 ICRGH-------FALWSHCNNDWNNGTSCITMADQYLCKNHTKVMANST-LWNSSLPIPDKMVYF 249

  Fly   179 ----------------KSHFESF--QNDSELNDY-----------EISWHLSGLFALVWATIAFI 214
                            :.:|.::  |..|.:.|:           .:.|.|:||..|..|.|   
 Worm   250 NGACQDANGTDVSTATEQYFMTYIVQPSSGMLDFGGFNWPVFAAMSVCWLLTGLGILKGAKI--- 311

  Fly   215 FYKFSEPAKFGKCIRYMVIGTVALLLVCFVRFLFLPGAHLGLKNYM-TPSIEEFVVGTSSTFIMA 278
                     .||.....|:....|::|.|:..:|..|:.:||:.|. ||:..:..  ...|:..|
 Worm   312 ---------MGKISYVSVLVPYVLVVVLFINGVFQDGSGVGLEMYFGTPNYTKLY--EQDTWTEA 365

  Fly   279 LQ----AFGAGWGSVITLSSFNGFKTNIMSYSWIISFGQIFIYIMFGMVSFMLEHYFL------- 332
            |:    :...|.|.:|:|||::..:.||...:.|:..|...:.::.|...|....|..       
 Worm   366 LKQLCFSLSVGHGGLISLSSYSPKRNNIFRDALIVIIGDTTMSLVGGGAVFATLGYLAKATGQDV 430

  Fly   333 ------GLPKPLFETQVINHWVLFLSSASALSSLGWPNLWTFIYYTMLLMAALIVITTQIFTILQ 391
                  ||.            :.|:....|::.:..|.||.||::.||.:.........:.....
 Worm   431 KDVVKSGLS------------LAFVVYPEAMTRMPVPWLWCFIFFLMLFLLGASTEIALVDVFCS 483

  Fly   392 SLFDEFEQLRAKKQEVTLGLIGGLAVCSLYFCTNHGVLYFAIL-SIDAIFSQTLLHLLLLLVVLW 455
            .::|::.:.|.:|..|.:.....|....|.|.|..|..:|.:. ...|.||.....:..|||:::
 Worm   484 CIYDQYPRFRNRKWIVVIAWCSVLYCIGLVFSTRAGYYWFEMFDEYAAGFSSVCTVVCELLVMMY 548

  Fly   456 VYGRDRFQKDIKFMLGQP---------------FASWKVFILRFVAPPTLVICLVLEIKMCLEEH 505
            :||....:.||..::|..               .|:|.|     ::|.   |.|:|.....:.|:
 Worm   549 IYGFRNVRDDITEVVGHARNKFTGAIGAHSWYFTANWMV-----ISPS---IALILVGLSFVREY 605

  Fly   506 SYSS------SVLHFMAIILVGLPILAIPAY---GFYYIHQRPGSISELF 546
            .|..      :|.......|..||::.:|.:   .|.....|..|...||
 Worm   606 PYMGRHDIYPAVFDIFGWFLSFLPVIIVPIFMLLNFIRCRNRGHSYRTLF 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 118/562 (21%)
snf-5NP_496735.1 SLC6sbd 83..601 CDD:271359 118/571 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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