DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and snf-5

DIOPT Version :10

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_496735.1 Gene:snf-5 / 174923 WormBaseID:WBGene00004904 Length:728 Species:Caenorhabditis elegans


Alignment Length:635 Identity:132/635 - (20%)
Similarity:239/635 - (37%) Gaps:147/635 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PFSPDLNRGNWEKPTDYIFACFGLALKLDIFVASFWFF-----FNTGIFGMVPYLMYMVIYLVPI 64
            |...:..|..:....:::....|||:.|    .:.|.|     .|.|...::|||....::.:|.
 Worm    75 PEEEEEKRDGFGNSFEFVLTSLGLAVGL----GNIWRFPTRAYNNGGSAFLIPYLTCAFLFGLPA 135

  Fly    65 MVIHSYMGQFSSSGFISAF-RLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPW 128
            :......||:........| |:.|:.:|:|::.:|:...:.|||.:..:...::::|        
 Worm   136 VYFEFLTGQYQGKSPPVIFRRVRPILEGVGWMGVFVAALVAIYYIVIVSWISIYMIN-------- 192

  Fly   129 SCEGFKSWQNDTIAKWSICN---------ATIAEEV-----AKETENDTYFYITNIHVP-SVLYF 178
            .|.|.       .|.||.||         .|:|::.     .|...|.| .:.:::.:| .::||
 Worm   193 ICRGH-------FALWSHCNNDWNNGTSCITMADQYLCKNHTKVMANST-LWNSSLPIPDKMVYF 249

  Fly   179 ----------------KSHFESF--QNDSELNDY-----------EISWHLSGLFALVWATIAFI 214
                            :.:|.::  |..|.:.|:           .:.|.|:||..|..|.|   
 Worm   250 NGACQDANGTDVSTATEQYFMTYIVQPSSGMLDFGGFNWPVFAAMSVCWLLTGLGILKGAKI--- 311

  Fly   215 FYKFSEPAKFGKCIRYMVIGTVALLLVCFVRFLFLPGAHLGLKNYM-TPSIEEFVVGTSSTFIMA 278
                     .||.....|:....|::|.|:..:|..|:.:||:.|. ||:..:..  ...|:..|
 Worm   312 ---------MGKISYVSVLVPYVLVVVLFINGVFQDGSGVGLEMYFGTPNYTKLY--EQDTWTEA 365

  Fly   279 LQ----AFGAGWGSVITLSSFNGFKTNIMSYSWIISFGQIFIYIMFGMVSFMLEHYFL------- 332
            |:    :...|.|.:|:|||::..:.||...:.|:..|...:.::.|...|....|..       
 Worm   366 LKQLCFSLSVGHGGLISLSSYSPKRNNIFRDALIVIIGDTTMSLVGGGAVFATLGYLAKATGQDV 430

  Fly   333 ------GLPKPLFETQVINHWVLFLSSASALSSLGWPNLWTFIYYTMLLMAALIVITTQIFTILQ 391
                  ||.            :.|:....|::.:..|.||.||::.||.:.........:.....
 Worm   431 KDVVKSGLS------------LAFVVYPEAMTRMPVPWLWCFIFFLMLFLLGASTEIALVDVFCS 483

  Fly   392 SLFDEFEQLRAKKQEVTLGLIGGLAVCSLYFCTNHGVLYFAIL-SIDAIFSQTLLHLLLLLVVLW 455
            .::|::.:.|.:|..|.:.....|....|.|.|..|..:|.:. ...|.||.....:..|||:::
 Worm   484 CIYDQYPRFRNRKWIVVIAWCSVLYCIGLVFSTRAGYYWFEMFDEYAAGFSSVCTVVCELLVMMY 548

  Fly   456 VYGRDRFQKDIKFMLGQP---------------FASWKVFILRFVAPPTLVICLVLEIKMCLEEH 505
            :||....:.||..::|..               .|:|.|     ::|.   |.|:|.....:.|:
 Worm   549 IYGFRNVRDDITEVVGHARNKFTGAIGAHSWYFTANWMV-----ISPS---IALILVGLSFVREY 605

  Fly   506 SYSS------SVLHFMAIILVGLPILAIPAY---GFYYIHQRPGSISELF 546
            .|..      :|.......|..||::.:|.:   .|.....|..|...||
 Worm   606 PYMGRHDIYPAVFDIFGWFLSFLPVIIVPIFMLLNFIRCRNRGHSYRTLF 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 118/562 (21%)
snf-5NP_496735.1 SLC6sbd 83..601 CDD:271359 118/571 (21%)

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