DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and snf-3

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_493910.2 Gene:snf-3 / 173493 WormBaseID:WBGene00004902 Length:600 Species:Caenorhabditis elegans


Alignment Length:594 Identity:120/594 - (20%)
Similarity:229/594 - (38%) Gaps:129/594 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SPDLNRGNWEKPTDYIFACFGLALKLDIFVASFWFFFNTGIFGMVPYLMY-------MVIYL--- 61
            |.:.:||.|....|::.:....|:.|    .:.|.|         |||.|       :|:|:   
 Worm    25 SEEPDRGQWTGKFDFLMSMVAYAVGL----GNVWRF---------PYLCYKNGGGSFLVVYMIFF 76

  Fly    62 ----VPIMVIHSYMGQFSSSGFISAFRLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSF 122
                |||.::...:||:...|.:..:.:.|||:|:|..::.:....:.|:.:..|..:.::::|.
 Worm    77 CLAAVPIFLMEVTVGQYLQKGAMEMWLMCPLFRGVGIGNVVIAFMCIAYFCVIVAWAMFYMISSI 141

  Fly   123 RPTLPW-SCEGFKSWQNDTIAKWSICNATIAEEVAKETENDTYFYITNIHVPSVLYFKSHFESFQ 186
            ....|| :|..:  | ||........|.|   |:|:         |..:...:..:.::..|.|.
 Worm   142 AWVFPWETCNNY--W-NDATCVTGKENFT---ELAR---------IKALVASAGGHTQTSVEQFW 191

  Fly   187 NDSELNDY-------EISWHLSGLFALVWATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVCFV 244
            ....|:|.       .|.|.|..:.|..|..:.|..:|....|:  |.:.:..:....|:.:..:
 Worm   192 EKRVLHDTGDISEFGGIQWELFFIMAAAWLIVYFALWKGITQAR--KFVYFCALFPYVLIFILLI 254

  Fly   245 RFLFLPGAHLGLKNYMTPSIEEFV-------VGTSSTFIMALQAFGAGWGSVITLSSFNGFKTNI 302
            |.|.|.||..|:..|:.|:....:       .||     ....::|.|:|::|.|.|.|.|..|.
 Worm   255 RGLTLEGAGTGIYFYLKPNATRLLDTAVWKDAGT-----QVFYSYGVGFGALIALGSHNKFNHNC 314

  Fly   303 MSYSWIISF--------GQIFIYIMFGMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSASALSS 359
            ...:..:.|        ....::.:.|.:|.:.:.....:.||       ...:.||:.....|:
 Worm   315 FKDAITMCFINGCTSITAGFAVFSILGYMSHVAQKDISEIVKP-------GVGLAFLAYPEVASN 372

  Fly   360 LGWPNLWTFIYYTMLLMAAL---IVITTQIFTILQSLFDEFEQLRAKKQEVTLGLIGGLAVCSLY 421
            |....::..:::.|:.:..|   :.:...:||.|:   |.|..||..|:: :||:.     |..:
 Worm   373 LPMKQVFAVLFFLMITILGLDSQVCMMEGLFTALE---DAFPILRKYKKQ-SLGIF-----CLFF 428

  Fly   422 FC------TNHGVLYFAILSIDAIFSQTLLHLLLLLVV--LWVYGRDRFQKDIKFMLGQPFASWK 478
            ||      |:.|..:..:..........||.::...||  .:.:|....:|.:..|:|.......
 Worm   429 FCIGIPMVTHSGSHWLTLFDAYGASGYALLFVVFFEVVGLAYGFGAHNIRKALHEMIGVTLPKGI 493

  Fly   479 VFILRFVAPPTLVICLVLEIKMCLEEHSYSSSVLHFMAI-----------------ILVGLPILA 526
            .::.:|.||.|.::..|    .|         |:::..:                 .|....::.
 Worm   494 EYVWKFCAPATSLVLFV----FC---------VVYYHPVKYPDGKDFPFWANAFGWFLSSCSMVV 545

  Fly   527 IPAYGFYYI 535
            ||.|..||:
 Worm   546 IPGYAIYYL 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 108/526 (21%)
snf-3NP_493910.2 SLC6sbd-TauT-like 30..571 CDD:271387 119/589 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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