DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and Slc6a5

DIOPT Version :10

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_063131123.1 Gene:Slc6a5 / 171148 RGDID:621824 Length:812 Species:Rattus norvegicus


Alignment Length:610 Identity:154/610 - (25%)
Similarity:264/610 - (43%) Gaps:81/610 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RGNWEKPTDYIFACFGLALKL-DIFVASFWFFFNTGIFGMVPYLMYMVIYLVPIMVIHSYMGQFS 75
            ||||....|:|.:..|.|:.| :::...:..|.|.|...::||||.:.:..:||..:...:|||:
  Rat   206 RGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLMMLALAGLPIFFLEVSLGQFA 270

  Fly    76 SSGFISAFRLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPW-SCEGFKSWQND 139
            |.|.:|.::..|..:|.|...|.:::.:.|||.:.....|.::..||...||| ||.  ..|...
  Rat   271 SQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVIICYTLFYLFASFVSVLPWGSCN--NPWNTP 333

  Fly   140 TI---AKWSICNATIAEEVAKETENDTYFYITNIHVPSVLYFKSHFESFQNDSELNDY------- 194
            ..   .|..:.:..|.:....:.:|.|:......::..|.:.....::|.:.||  :|       
  Rat   334 ECKDKTKLLLDSCVIGDHPKIQIKNSTFCMTAYPNLTMVNFTSQANKTFVSGSE--EYFKYFVLK 396

  Fly   195 ---------EISWHLSGLFALVWATIAFIFYKFSEPAK----FGKCIRYMVIGTVALLLVCFVRF 246
                     ||.|.|:....|.|..:      ::..||    .||.:.:.......:|::..:|.
  Rat   397 ISAGIEYPGEIRWPLAFCLFLAWVIV------YASLAKGIKTSGKVVYFTATFPYVVLVILLIRG 455

  Fly   247 LFLPGAHLGLKNYMTPSIEEFVVGT----SSTFIMALQAFGAGWGSVITLSSFNGFKTNIMSYSW 307
            :.||||..|:..::||..|:....|    ::|.|..  :..|.||.:|||||:|.|..|....:.
  Rat   456 VTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFF--SLSAAWGGLITLSSYNKFHNNCYRDTL 518

  Fly   308 II----SFGQIFI-YIMFGMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSASALSSLGWPNLWT 367
            |:    |...||. :::|.::.||.....:.:.....:    ...:.|:....||:.|.....|.
  Rat   519 IVTCTNSATSIFAGFVIFSVIGFMANERKVNIENVADQ----GPGIAFVVYPEALTRLPLSPFWA 579

  Fly   368 FIYYTMLLMAALIVITTQIFTILQSLFDEF-EQLRAKKQEVTLGLIGGLAVCSLYF------CTN 425
            .|::.|||...|..:...|.||:.|:.||| :.||..|...|||      .|..:|      .|.
  Rat   580 IIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLG------CCICFFIMGFPMITQ 638

  Fly   426 HGVLYFAIL-SIDAIFSQTLLHLLLLLVVLWVYGRDRFQKDIKFMLG-QPFASWKVFILRFVAPP 488
            .|:..|.:: :..|.::..::.:..|:.:.:|||..||.:||:.|:| ||...||| ...||.|.
  Rat   639 GGIYMFQLVDTYAASYALVIIAIFELVGISYVYGLQRFCEDIEMMIGFQPNIFWKV-CWAFVTPT 702

  Fly   489 TLVICLVLEI----KMCLEEHSYS--SSVLHFMAIILVGLPILAIPAYGFYYIHQRPGSISELFR 547
            .|...|....    .|....:.|.  |.||.:   :::...::.||......::..||...|..:
  Rat   703 ILTFILCFSFYQWEPMTYGSYRYPNWSMVLGW---LMLACSVIWIPIMFVIKMYLAPGRFIERLK 764

  Fly   548 AT-----DWYPVEMEYR-QQYGELV 566
            ..     ||.|...::| ::|..::
  Rat   765 LVCSPQPDWGPFLAQHRGERYKNMI 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 135/521 (26%)
Slc6a5XP_063131123.1 None

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