DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13793 and Slc6a5

DIOPT Version :10

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_006540608.1 Gene:Slc6a5 / 104245 MGIID:105090 Length:831 Species:Mus musculus


Alignment Length:610 Identity:153/610 - (25%)
Similarity:264/610 - (43%) Gaps:81/610 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RGNWEKPTDYIFACFGLALKL-DIFVASFWFFFNTGIFGMVPYLMYMVIYLVPIMVIHSYMGQFS 75
            ||||....|:|.:..|.|:.| :::...:..|.|.|...::||||.:.:..:||..:...:|||:
Mouse   225 RGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLMMLALAGLPIFFLEVSLGQFA 289

  Fly    76 SSGFISAFRLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPW-SCEGFKSWQND 139
            |.|.:|.::..|..:|.|...|.:::.:.|||.:.....|.::..||...||| ||.  ..|...
Mouse   290 SQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVIICYTLFYLFASFVSVLPWGSCN--NPWNTP 352

  Fly   140 TI---AKWSICNATIAEEVAKETENDTYFYITNIHVPSVLYFKSHFESFQNDSELNDY------- 194
            ..   .|..:.:..|.:....:.:|.|:......::..|.:.....::|.:.||  :|       
Mouse   353 ECKDKTKLLLDSCVIGDHPKIQIKNSTFCMTAYPNLTMVNFTSQTNKTFVSGSE--EYFKYFVLK 415

  Fly   195 ---------EISWHLSGLFALVWATIAFIFYKFSEPAK----FGKCIRYMVIGTVALLLVCFVRF 246
                     ||.|.|:....|.|..:      ::..||    .||.:.:.......:|::..:|.
Mouse   416 ISAGIEYPGEIRWPLAFCLFLAWVIV------YASLAKGIKSSGKVVYFTATFPYVVLVILLIRG 474

  Fly   247 LFLPGAHLGLKNYMTPSIEEFVVGT----SSTFIMALQAFGAGWGSVITLSSFNGFKTNIMSYSW 307
            :.||||..|:..::||..|:....|    ::|.|..  :..|.||.:|||||:|.|..|....:.
Mouse   475 VTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFF--SLSAAWGGLITLSSYNKFHNNCYRDTL 537

  Fly   308 II----SFGQIFI-YIMFGMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSASALSSLGWPNLWT 367
            |:    |...||. :::|.::.||.....:.:.....:    ...:.|:....||:.|.....|.
Mouse   538 IVTCTNSATSIFAGFVIFSVIGFMANERKVNIENVADQ----GPGIAFVVYPEALTRLPLSPFWA 598

  Fly   368 FIYYTMLLMAALIVITTQIFTILQSLFDEF-EQLRAKKQEVTLGLIGGLAVCSLYF------CTN 425
            .|::.|||...|..:...|.||:.|:.||| :.||..|...|||      .|..:|      .|.
Mouse   599 IIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLG------CCICFFIMGFPMITQ 657

  Fly   426 HGVLYFAIL-SIDAIFSQTLLHLLLLLVVLWVYGRDRFQKDIKFMLG-QPFASWKVFILRFVAPP 488
            .|:..|.:: :..|.::..::.:..|:.:.:|||..||.:||:.|:| :|...||| ...||.|.
Mouse   658 GGIYMFQLVDTYAASYALVIIAIFELVGISYVYGLQRFCEDIEMMIGFKPNIFWKV-CWAFVTPT 721

  Fly   489 TLVICLVLEI----KMCLEEHSYS--SSVLHFMAIILVGLPILAIPAYGFYYIHQRPGSISELFR 547
            .|...|....    .|....:.|.  |.||.:   :::...::.||......::..||...|..:
Mouse   722 ILTFILCFSFYQWEPMTYGSYRYPNWSMVLGW---LMLACSVIWIPIMFVIKMYLAPGRFIERLK 783

  Fly   548 AT-----DWYPVEMEYR-QQYGELV 566
            ..     ||.|...::| ::|..::
Mouse   784 LVCSPQPDWGPFLAQHRGERYKNMI 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 134/521 (26%)
Slc6a5XP_006540608.1 SLC6sbd_GlyT2 225..821 CDD:271389 153/610 (25%)

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