DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13793 and Slc6a20a

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_631881.1 Gene:Slc6a20a / 102680 MGIID:2143217 Length:592 Species:Mus musculus


Alignment Length:559 Identity:135/559 - (24%)
Similarity:227/559 - (40%) Gaps:124/559 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RGNWEKPTDYIFACFGLALKLDIFVASFWFF------FNTGIFGMVPYLMYMVIYLVPIMVIHSY 70
            |..|..|..::|||...|:.|    .:.|.|      :..|.| :|||::.:::..:|::.:...
Mouse     5 RPQWGHPLQFVFACISYAVGL----GNVWRFPYLCQMYGGGSF-LVPYIIMLIVEGMPLLYLELA 64

  Fly    71 MGQFSSSGFISAFR-LSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPWSCEGFK 134
            :||....|.|.|:| :||...|:|..|:.::..|.:||.:..|....::.:||:..||       
Mouse    65 VGQRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQDPLP------- 122

  Fly   135 SWQNDTIAKWSIC----NATIAEEVAKETENDTYF-YITNIHV-PSVLYFKSHFESFQNDSELND 193
                     ||:|    |.|..:|..::..:..|| |...::: ||:.         :|..    
Mouse   123 ---------WSVCPLNSNHTGYDEECEKASSTQYFWYRKTLNISPSIQ---------ENGG---- 165

  Fly   194 YEISWHLSGLFALVWATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVCFVRFLFLPGAHLGLKN 258
              :.|..:....|.|..:.....:.:|..  ||.:.:.......:|::..||.|.|.||..||..
Mouse   166 --VQWEPALCLTLAWLMVYLCILRGTEST--GKVVYFTASMPYCVLIIYLVRGLTLHGATNGLMY 226

  Fly   259 YMTPSIEEFVVGTSSTFIMALQAF---GAGWGSVITLSSFNGFKTNIMSYSWIIS--------FG 312
            ..||.:|: :....:....|.|.|   |.|:||:|..:|:|....|...::.|:|        |.
Mouse   227 MFTPKMEQ-LANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSNNCQKHAIIVSIINSSTSIFA 290

  Fly   313 QIFIYIMFGMV------------------SFMLEHYFL--------------------------- 332
            .|..:.::|..                  ||.||..||                           
Mouse   291 SIVTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFLTVSNLEEVKNYLASTYPNKYSEVFPHI 355

  Fly   333 ---GLPKPLFETQVINHWVLFLSSASALSSLGWPNLWTFIYYTMLLMAALIVITTQIFTILQSLF 394
               .|...| :|.|....:.|:....|:.::....||:.:|:.||||..:..:......||..|.
Mouse   356 RNCSLESEL-DTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLMLGIGSMLGNTAAILTPLT 419

  Fly   395 DEFEQLRAKKQEVTLGLIGGLAVCS--LYFCTNHGVLYFAILSIDAIFSQTLLHLLLLLV----V 453
            |.........:|...||: .|..|:  :.|....|..:|.|.:   .::.||..||::||    |
Mouse   420 DSKVISSYLPKEAISGLV-CLINCAVGMVFTMEAGNYWFDIFN---DYAATLSLLLIVLVETIAV 480

  Fly   454 LWVYGRDRFQKDIKFMLGQPFA-SWKVFILRFVAPPTLV 491
            .:|||..||:.|::.|.|:..: .||| :..||:|..:|
Mouse   481 CYVYGLKRFESDLRAMTGRTLSWYWKV-MWAFVSPLLIV 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 132/552 (24%)
Slc6a20aNP_631881.1 SLC5-6-like_sbd 2..577 CDD:294310 135/559 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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