DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13793 and slc6a8

DIOPT Version :10

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_002935539.1 Gene:slc6a8 / 100489909 XenbaseID:XB-GENE-986840 Length:644 Species:Xenopus tropicalis


Alignment Length:613 Identity:145/613 - (23%)
Similarity:254/613 - (41%) Gaps:103/613 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FSPDLNRG-----NWEKPTDYIFACFGLALKL-DIFVASFWFFFNTGIFGMVPYLMYMVIYLVPI 64
            |.|:...|     .|....|:|.:|.|.|:.| :::...:..:.|.|...::||::..::..:||
 Frog    47 FPPNCKEGIPERDTWTSQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYILIAILGGIPI 111

  Fly    65 MVIHSYMGQFSSSGFISAFRLSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPWS 129
            ..:...:|||..:|.|:.:.::|||:|:|:.|:.:......||.:.....:.:::.||...||||
 Frog   112 FFLEIALGQFMKAGSIAVWNIAPLFQGIGFASVVIVFFCNTYYILILTWGVYYLVKSFSAVLPWS 176

  Fly   130 -CEGFKSWQN----DTIAKWSICNATIAEEVAKETEN---DTYFYITNIHVPSVLYFKSHFESFQ 186
             |.  .:|.:    |...:....|.|........|.|   |....||......||...|..:...
 Frog   177 HCN--NTWNSPDCVDIFRQEDCTNGTANSTFGNLTCNELADKVSPITEFWEKKVLRLSSGLDDIG 239

  Fly   187 NDSELNDYEISWHLSGLFALV--WATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVCFVRFLFL 249
            :        |:|.|  |..|:  |..:.|..:|..:..  ||.:.:.......:||:..||...|
 Frog   240 S--------INWEL--LLCLIGCWLLVYFCVWKGVKST--GKIVYFTATFPYVVLLILLVRGAML 292

  Fly   250 PGAHLGLKNYMTPSIEEFVVGTSSTFIMA----LQAFGAGWGSVITLSSFNGFKTNIMSYSWI-- 308
            |||..|:..|:.|...:  :||:..:|.|    ..::..|.|::..|.|:|.|..:....::|  
 Frog   293 PGATEGIIYYLKPDWSK--LGTAQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNDCYKDAFILA 355

  Fly   309 -ISFGQIFI--YIMFGMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSASALSSLGWPNLWTFIY 370
             |:.|..|.  :::|.::.||.....:.:.| :.|:   ...:.|::...|:|.:....||:.::
 Frog   356 VINSGTSFFAGFVVFSILGFMANEQGVDISK-VAES---GPGLAFIAYPRAVSLMPVAPLWSALF 416

  Fly   371 YTMLLMAAL---IVITTQIFTILQSLFDEFEQLRAKKQEVTLGLIGGLAVCSLYF------CTNH 426
            :.|||:..|   .|....:.|.:..|.......|.:: |:.:.:     .|::.|      .|..
 Frog   417 FFMLLLLGLDSQFVGVEGLITAILDLLPARYYFRFQR-EIAVAI-----CCAIMFLIDLSMLTEG 475

  Fly   427 GVLYFAILSIDAIFSQTLLHLLL--LLVVLWVYGRDRFQKDIKFMLG-QPFASWKVFILRFVAPP 488
            |:..|.:....:....|||....  .:||.||||.|||..||..|:| :|| .|..:...||.| 
 Frog   476 GMYVFQLFDYYSASGMTLLWQTFWQCVVVAWVYGADRFMDDIARMIGYRPF-PWMKWCWSFVTP- 538

  Fly   489 TLVICL------VLEIKMCLEEHSYS--------------SSVLHFMAIILVGLPILAIPAYGFY 533
              .:|:      ::..|.....:||:              ||             :|.:|....|
 Frog   539 --FVCMAIFLFNLINYKPLTYNNSYTYPWWGEAIGWGFALSS-------------MLCVPVTFLY 588

  Fly   534 YIHQRPGSISELFRATD---WYPVEMEY 558
            .|....||:.|.::...   |....:||
 Frog   589 KITCAKGSLRERWQHLTKPIWGAHHLEY 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 126/516 (24%)
slc6a8XP_002935539.1 SLC5-6-like_sbd 58..644 CDD:444915 142/602 (24%)

Return to query results.
Submit another query.