DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13793 and si:ch211-132b12.3

DIOPT Version :9

Sequence 1:NP_609136.2 Gene:CG13793 / 34047 FlyBaseID:FBgn0031935 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001076419.1 Gene:si:ch211-132b12.3 / 100002232 ZFINID:ZDB-GENE-050419-161 Length:577 Species:Danio rerio


Alignment Length:618 Identity:138/618 - (22%)
Similarity:249/618 - (40%) Gaps:110/618 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RGNWEKPTDYIFACFGLALKLDIFVASFWFF------FNTGIFGMVPYLMYMVIYLVPIMVIHSY 70
            ||.|.:..:::.|..|..    :.|.:.|.|      ...|:| ::|||::::...||:.::.:.
Zfish    11 RGFWGRKAEFLLAVAGNV----VGVGNVWRFPYLCYRNGGGVF-LIPYLVFVMTCGVPLFLLETV 70

  Fly    71 MGQFSSSGFISAFR-LSPLFKGMGYVSLFLTITLLIYYTIFAAVPLLFVLNSFRPTLPW-SCEGF 133
            ||||:..|.|:.:. |.||.:|:||....:.:...:|:||..|..|.:::.||...||| ||:..
Zfish    71 MGQFTHEGGITCWHLLCPLAQGVGYAGQLIELYSCMYFTIILAWALFYLIFSFSSQLPWASCDNI 135

  Fly   134 KSWQNDTIAKWSICNATIAEEVAKETENDTYFYITNIHVPSVLYFKSHFESFQNDSELNDYEISW 198
              |..|.....:..|.|.    .:.|:.::....|......||......|...        :|:|
Zfish   136 --WNTDNCVNLAAGNLTF----NRTTQINSTSAATEFWERRVLSLSGGIEEIG--------KINW 186

  Fly   199 HLSGLFALVWATIAFIFYKFSEPAKFGKCIRYMVIGTVALLLVCFVRFLFLPGAHLGLKNYMTPS 263
            .::....::|....|..:|..:..  ||.:.:.......:|||..:|.|.||||..|:..|:.|.
Zfish   187 EIALCLFVMWIICYFCIWKGVKST--GKVVYFTATFPYVMLLVLLIRGLTLPGALQGVVFYLYPE 249

  Fly   264 IEEFV-------VGTSSTFIMALQAFGAGWGSVITLSSFNGFKTNIMSYS-W--IISFGQIFI-- 316
            .....       .||...|..:|.:     |.:|.|.|:|.:..|....| |  :::.|..|:  
Zfish   250 PAHLADPQVWMEAGTQVFFSYSLCS-----GILIALGSYNQYSNNCYRDSFWLCLLNSGTSFVAG 309

  Fly   317 YIMFGMVSFMLEHYFLGLPKPLFETQVINHWVLFLSSASALSSLGWPNLWTFIYYTMLLMAAL-- 379
            :.:|.::.||.  :..|:  |:.|.......:.|::...|::.:.:|.||...::.|:::..|  
Zfish   310 FAVFSVLGFMA--HVQGV--PVEEVAESGPGLAFIAYPQAVAMMPFPQLWAVCFFIMIILLGLDS 370

  Fly   380 -IVITTQIFTILQSLFDEFEQLRAKKQEVTLGLIGGLAVC------SLYFCTNHGVLYFAILSID 437
             .|....:.|.:..||.|..: ||.::|:.:     |.:|      .|...|..|:..|.:....
Zfish   371 QFVAMECVVTSVTDLFPEVLR-RAGRRELFV-----LLLCLTCFFGQLIMVTEGGMYVFQLFDNY 429

  Fly   438 AIFSQTLLHLLLL--LVVLWVYGRDRFQKDIK----------FMLGQPFASWKVFILRFVAPPTL 490
            |......|.|.:.  |.:.|::|.::....||          |||     .|| ::...|:..:.
Zfish   430 ASNGACFLFLSVFESLTIGWIFGAEKMFDIIKDMTESRPNYWFML-----CWK-YLTPLVSLTSF 488

  Fly   491 VICLVLEIKMCLEEHSYSSSVLHFMAIILVGLPILAIPAYGFYYIHQRPGSISELFRATDWYPVE 555
            |..:|....:............|.:..:|....||.:|.:....:....||:             
Zfish   489 VYSMVRYTPLTYNRWYVYPDWAHVLGWLLALSSILLVPGWALGQMCTGKGSL------------- 540

  Fly   556 MEYRQQYGEL-----------VQKSEMTHQLFD 577
               :|::|.|           :|..|.|.::.|
Zfish   541 ---KQRWGHLCSPDTNLMLSSIQIQEQTAEMED 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13793NP_609136.2 SLC5-6-like_sbd 19..498 CDD:271356 121/519 (23%)
si:ch211-132b12.3NP_001076419.1 SLC6sbd-TauT-like 11..550 CDD:271387 134/596 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.