DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ntl and Slc6a2

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_112633.2 Gene:Slc6a2 / 83511 RGDID:621822 Length:617 Species:Rattus norvegicus


Alignment Length:542 Identity:211/542 - (38%)
Similarity:346/542 - (63%) Gaps:14/542 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMVILAGIPLFYMEILIGQFS 88
            |..|..|.:|:||::|:|:.:.||||||||||::||.||||||.|.:|:||:||||||:.:|||:
  Rat    56 RETWGKKIDFLLSVVGFAVDLANVWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQFN 120

  Fly    89 STGCTGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCFFKKVPWEDCSNSWNTDDC 153
            ..|...::::.|..||.|.|.:::..|...||:|||::.:..:|..|...:||.:|.::||:.:|
  Rat   121 REGAATVWKICPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFASFTLNLPWTNCGHAWNSPNC 185

  Fly   154 -----VTASDMGKQNSSDVFK-TSADEFFHLEVLRI--STDISDLGGMVWEQLTALIITWIIIYF 210
                 :.||.:|.......:| |.|.||:...||.:  |:.|.|:|...|:.|..|::..:::||
  Rat   186 TDPKLLNASVLGDHTKYSKYKFTPAAEFYERGVLHLHESSGIHDIGLPQWQLLLCLMVVIVVLYF 250

  Fly   211 CLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYPEWHRLLDLKVWADAAVQM 275
            .|.:|:|:.||||:.|...||.:||:||:.|.|||||..||..||:.:::||.:..||.|||.|:
  Rat   251 SLWKGVKTSGKVVWITATLPYFVLFVLLVHGVTLPGASNGINAYLHIDFYRLKEATVWIDAATQI 315

  Fly   276 FFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSVLGFLSEKSGIPVESVA 340
            ||.:|.|:|.::..||::.|.||...|::|..:||..||.::||.:||:||:::.:..:.:|.||
  Rat   316 FFSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINCVTSFISGFAIFSILGYMAHEHKVKIEDVA 380

  Fly   341 TGGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIMSSILDEWYWVRSHKCKL 405
            |.||||.||.|||||:.|.....||::||.||..||:||....:||:::.:.|::..::.|:   
  Rat   381 TEGAGLVFVLYPEAISTLSGSTFWAVLFFLMLLALGLDSSMGGMEAVITGLADDFQVLKRHR--- 442

  Fly   406 TLISCLIFLG--LSSIMC-TNGGMFILQLFDWYSSAIAVIVICLVEIIMVAWIYGIKNFMLDVEF 467
            .|.:|.:.||  |.::.| |.||:::|.|.|.:::..:::...|:|.|.|:|.||:..|..|::.
  Rat   443 KLFTCAVTLGTFLLAMFCITKGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSNDIQQ 507

  Fly   468 MLGKRPTLYWRIVWQVVTPVIIIFILITSIVFIRTITYNNIPYPQWAIIIGWASCFTSVMWIPLY 532
            |:|.:|.||||:.|:.|:|..::|:::.||:..:.:||::..||.||..:||....:|::.:|.|
  Rat   508 MMGFKPGLYWRLCWKFVSPAFLLFVVVVSIINFKPLTYDDYVYPPWANWVGWGIALSSMILVPAY 572

  Fly   533 IFYIMIRKRATLCDSLKKRLKP 554
            :.|.....|.:|.:.:...:.|
  Rat   573 VIYKFFSIRGSLWERVAYGITP 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 210/540 (39%)
Slc6a2NP_112633.2 SLC5-6-like_sbd 56..615 CDD:382020 211/542 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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