DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and slc6a13

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001072913.1 Gene:slc6a13 / 780375 XenbaseID:XB-GENE-5947897 Length:601 Species:Xenopus tropicalis


Alignment Length:579 Identity:237/579 - (40%)
Similarity:356/579 - (61%) Gaps:24/579 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PPTTNATRKDKRIERDE---NRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYL 67
            |||.....|:.::|..:   .||||.:|.||:||:.|..||:|||||||||||::||.||.||||
 Frog    16 PPTKPLMEKEPKMEDGDMMIERGQWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYL 80

  Fly    68 LMVILAGIPLFYMEILIGQFSST-GCTGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMI 131
            :.:...|||:|::|..:||::|. |.|...::.||.:|.|.:..|:.....|||.|::::.:..:
 Frog    81 IFLFTCGIPVFFLETALGQYTSQGGVTAWRKICPLFEGIGYSSQVIVMLLNCYYIVVLAWALFYL 145

  Fly   132 FYCFFKKVPWEDCSNSWNTDDCVTASDMGKQNSSDVF----KTSADEFFHLEVLRISTDISDLGG 192
            |..|..::||..|.:||||::|:   |..|.||:...    .:|..||:...|||||..|.::||
 Frog   146 FNSFTSELPWASCGHSWNTENCL---DFYKGNSTHNVTLNGTSSVIEFWERRVLRISDGIDNIGG 207

  Fly   193 MVWEQLTALIITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYP 257
            :.||....|::.|||.|||:.:|:||.|||||||..||||:|.:|||||.:||||..||:|||||
 Frog   208 LHWELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLIVLLIRGVSLPGALTGIQFYLYP 272

  Fly   258 EWHRLLDLKVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVF 322
            :..||.|.:||.||..|:||......|.:..:.|::.:.||...|.|.:..:|..||.:|||.:|
 Frog   273 DLSRLQDPQVWMDAGTQIFFSYAICLGCLTALGSYNKYNNNCYRDCVALCFLNSGTSFVAGFAIF 337

  Fly   323 SVLGFLSEKSGIPVESVATGGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAI 387
            |:|||::|:.|:.:..||..|.||||:.||.|::::|...|||..||||:.|||:||.||.:|::
 Frog   338 SILGFMAEEQGVHISDVAESGPGLAFIAYPRAVSMMPFSPLWACFFFFMVILLGLDSQFVCVESL 402

  Fly   388 MSSILDEWYWVRSHKCKLTL----ISCLIFL-GLSSIMCTNGGMFILQLFDWY-SSAIAVIVICL 446
            :::::|.:..:...|.:..|    :|.:.|| ||  ||.|.|||::.||||:| :|.:.::.:.:
 Frog   403 VTAVVDMYPTIFRKKNRRELLILGVSMISFLVGL--IMLTEGGMYVFQLFDYYAASGMCLLFVAI 465

  Fly   447 VEIIMVAWIYGIKNFMLDVEFMLGKRPTLYWRIVWQVVTPVIIIFILITSIVFIRTITYN-NIPY 510
            .|.:.|.|:||..||...||.|:|.|||...:..|..|||.:.:...:.|:|....:||| :..|
 Frog   466 FETLCVGWVYGADNFYDKVEHMIGYRPTGIIKYCWLFVTPAVCMATFLFSLVKYTPLTYNKHYVY 530

  Fly   511 PQWAIIIGWASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLKPLDWTPADPQDRAEYE 569
            |.|...|||....:|::.|||::.|    |.:|:..||.:|.:.|.:...|...:.:.|
 Frog   531 PWWGDAIGWLLALSSMVCIPLWVGY----KLSTIKGSLMERFRQLTFPDPDLPQKTQCE 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 229/541 (42%)
slc6a13NP_001072913.1 SLC5-6-like_sbd 37..579 CDD:382020 231/550 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.