DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ntl and slc6a1a

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001038752.2 Gene:slc6a1a / 692318 ZFINID:ZDB-GENE-060519-23 Length:679 Species:Danio rerio


Alignment Length:587 Identity:223/587 - (37%)
Similarity:360/587 - (61%) Gaps:25/587 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANNQPPTTNATRKDKRIERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIP 65
            :..|..|.|...:.:|..:...:|..|..|.:|:||.:|||||:||||||||||.::||.|||||
Zfish    20 ITTNDKPKTEDAKPEKNKKDIPDRETWGGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIP 84

  Fly    66 YLLMVILAGIPLFYMEILIGQFSSTGCTGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRM 130
            |.|.:|.||:|||::|..:||::|.|..|::::.|:.||.|:|..|::.:...||.|||::.:..
Zfish    85 YFLTLIFAGVPLFFLECALGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIAWALYY 149

  Fly   131 IFYCFFKKVPWEDCSNSWNTDDCVTASDMGKQNSSDVFKTSAD----EFFHLEVLRISTDISDLG 191
            ::..|...:||:.|:|.||||.|.|       |.|.|..|:..    ||:...|.:::..:...|
Zfish   150 LYNSFTTDLPWKSCNNPWNTDRCYT-------NYSIVDTTNLTSAVMEFWERNVHQMTDGLEKPG 207

  Fly   192 GMVWEQLTALIITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLY 256
            .:.......|.|.|:::|||:.:|:...||||||:..:||.:||||.|||.|||||.:||.||:.
Zfish   208 EIRVPLAITLAIAWVLVYFCIWKGVSWTGKVVYFSATYPYFMLFILFIRGVTLPGAKEGILFYIT 272

  Fly   257 PEWHRLLDLKVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVV 321
            |::.:|.:.:||.|||.|:||..|.|.|.::.:.|::.|.||...||:::..||.|||:.||||:
Zfish   273 PDFEKLKESEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYRDSIIVCCINSFTSMFAGFVI 337

  Fly   322 FSVLGFLSEKSGIPVESVATGGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEA 386
            ||::||:|..:..|:..||..|.||||:.||||:..|||..|||::||.||.:|||||.|..:|.
Zfish   338 FSIVGFMSHVTKRPIADVAASGPGLAFLAYPEAVTQLPVSPLWAILFFSMLLMLGIDSQFCTVEG 402

  Fly   387 IMSSILDEWYWVRSHKCKLTLISCLIF----LGLSSIMCTNGGMFILQLFDWYS-SAIAVIVICL 446
            .:::::||:..: ..|.:...|:|:..    :|||:|  |.||:::.:|||:|| |.:.::.:..
Zfish   403 FITALVDEFPRL-LRKRREIFIACVCVVSYAIGLSNI--TQGGLYVFKLFDYYSASGMCLLFLVF 464

  Fly   447 VEIIMVAWIYGIKNFMLDVEFMLGKRPTLYWRIVWQVVTPVIIIFILITSIVFIRTITYNNIPYP 511
            .|.|.::|.||:..|..:::.|:|.:|.::|::.|...||:::..:.:.|.|.:..:|.||..:|
Zfish   465 FECISISWCYGVNKFYDNIQEMIGYKPCIWWKLCWVFFTPLVVAGVFLFSAVQMVPLTMNNYVFP 529

  Fly   512 QWAIIIGWASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLKPLDWTPADPQDRAEYEAFRRQRR 576
            :|...:||....:|::.||.|:.|:.:..:.|..:.::..|:|    ||  ..||:.....:|:.
Zfish   530 KWGQGVGWLMALSSMVLIPGYMGYMFLNLKGTYKERIRIMLQP----PA--VKRAQENGPEQQQS 588

  Fly   577 MP 578
            .|
Zfish   589 QP 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 212/538 (39%)
slc6a1aNP_001038752.2 SLC5-6-like_sbd 2..588 CDD:294310 222/583 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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