DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ntl and slc6a4a

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001035061.1 Gene:slc6a4a / 664719 ZFINID:ZDB-GENE-060314-1 Length:646 Species:Danio rerio


Alignment Length:558 Identity:216/558 - (38%)
Similarity:349/558 - (62%) Gaps:14/558 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PTTNATRKDKRIERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMVI 71
            |.|..|...::...|..|..|..|.:|:||::|||:.:||||||||:||::||.|||:|||||.:
Zfish    74 PGTFRTLVVQQTSLDPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAV 138

  Fly    72 LAGIPLFYMEILIGQFSSTGCTGMFR-MTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCF 135
            ..|:||||||:.:|||..:||..::: :.|:.||.|.|..::..|...||:.|:::.:..:...|
Zfish   139 FGGVPLFYMELALGQFHRSGCISIWKHVCPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSF 203

  Fly   136 FKKVPWEDCSNSWNTDDCV----TASDMGKQNSSDVFKTSADEFFHLEVLRI--STDISDLGGMV 194
            ...:||..|:|.|||.:|.    |..::...|:|   .:.|:||:..:||::  |..:..||.:.
Zfish   204 RATLPWTTCNNRWNTPNCTHYLSTDLNVSWTNNS---ISPAEEFYVRQVLQVHLSPGLHQLGWVS 265

  Fly   195 WEQLTALIITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYPEW 259
            |:....|:..:.::||.:.:|:|:.||||:.|..||||:|.|||||||||||||:|:.|||.|:|
Zfish   266 WQLALCLLFIFTVVYFSIWKGVKTSGKVVWVTATFPYLVLLILLIRGATLPGAWRGVVFYLKPDW 330

  Fly   260 HRLLDLKVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSV 324
            .:||...||.|||.|:||.:|||:|.::..||::.|.||...|:::..|:|..||.|:|||:|:|
Zfish   331 KKLLTTTVWLDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSFLSGFVIFTV 395

  Fly   325 LGFLSEKSGIPVESVA-TGGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIM 388
            ||:::|.....||:|| ..|..|.|:.|.||||.:|....:|::||.|:.:||:||.|..||.::
Zfish   396 LGYMAEMRQQGVETVAKDAGPSLLFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVI 460

  Fly   389 SSILDEWYWVRSHKCKLTLIS--CLIFLGLSSIMCTNGGMFILQLFDWYSSAIAVIVICLVEIIM 451
            :::|||:..:.:.:.:..::.  |:.:||..|.: |.||.|:::||:.|::..|||.:..:|:|.
Zfish   461 TAMLDEFPHLLARRREWFVLGLVCVCYLGALSTL-TYGGAFVVKLFEEYATGPAVITVVFLEVIA 524

  Fly   452 VAWIYGIKNFMLDVEFMLGKRPTLYWRIVWQVVTPVIIIFILITSIVFIRTITYNNIPYPQWAII 516
            |:|.||...|..||:.|||..|.|:||:.|..:.|..::||:::.:.|...:...:..||.|..:
Zfish   525 VSWFYGTTRFCNDVQLMLGFAPGLFWRVCWIAICPCFLLFIIVSFLAFPPEVKLFDYLYPFWTTV 589

  Fly   517 IGWASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLKP 554
            :|:....:|.:.:|.|:.|.::..:.|....|.|.:.|
Zfish   590 LGYCIGVSSFICVPSYMVYHLVTTKGTFQQRLLKGITP 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 211/539 (39%)
slc6a4aNP_001035061.1 SLC5-6-like_sbd 91..628 CDD:294310 212/541 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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