DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and si:ch211-283g2.1

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_017211707.1 Gene:si:ch211-283g2.1 / 569007 ZFINID:ZDB-GENE-060531-57 Length:581 Species:Danio rerio


Alignment Length:558 Identity:210/558 - (37%)
Similarity:338/558 - (60%) Gaps:17/558 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMVILAGIPLFYMEIL 83
            :.:..|..|..:.||.|:.:|.|:|:||:||||||||||||.|||:|||||:::.||||.:||:.
Zfish     4 KEEAGRPTWSRQIEFTLAGIGCAVGLGNIWRFPYLCYRSGGGAFLLPYLLMLVVLGIPLLHMELT 68

  Fly    84 IGQFSSTG-CTGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCFFKKVPWEDCSNS 147
            :||:...| ...:.:..||.||.|:|.|.::.....||::||::.:..:|..|..::.|::|:|:
Zfish    69 LGQYLRRGPVLALAKACPLFKGVGMATVAISFIMCTYYNIIITWALYYMFSSFRSELLWQNCNNT 133

  Fly   148 WNTDDCVTASDMGKQNSSDVFKTSADEFFHLEVLRISTDISDLGGMVWEQLTALIITWIIIYFCL 212
            |||.:|   :|....:||.  .|::.:||:.:||..::.:.:.|.:.||....|::.||::|.|:
Zfish   134 WNTVNC---TDQVTNSSSS--STASQQFFNYKVLERTSGVEETGTLRWELFLLLLLAWILVYLCI 193

  Fly   213 MRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYPEWHRLLDLKVWADAAVQMFF 277
            .:|:||.|||||||..|||::|..|||....||||..||||::.|||.:||:::||.:||.|:|.
Zfish   194 FKGVKSTGKVVYFTALFPYVILLALLINNVQLPGALDGIKFFIIPEWDKLLNVQVWINAAAQIFN 258

  Fly   278 GIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSVLGFLSEKSGIPVESVATG 342
            .||.|:|.::.|||::::.||...|::.|...|..||:.||||:||..|::|....:||..:|..
Zfish   259 SIGIGFGSLMAMASYNNYNNNVLKDTLAIAITNSLTSIFAGFVIFSAFGYMSHLQNVPVSEIAVD 323

  Fly   343 GAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIMSSILDEW------YWVRSH 401
            |.||..|.||:|...:||..|||.:|||||..||:||.|..:|.:::|:||.:      :..|..
Zfish   324 GPGLVLVVYPQAFVTMPVAPLWAFLFFFMLLCLGLDSQFAMVEVMVTSLLDSYSKPILKHLKRKE 388

  Fly   402 KCKLTLISCLIFLGLSSIMCTNGGMFILQLFDWYSSAIAVIVICLVEIIMVAWIYGIKNFMLDVE 466
            ...|.:......||:.::|  ..|:::.||.|.|::.::::.:...|::.|.|.||:|....::.
Zfish   389 FLVLLVCGAAFLLGIPNVM--QVGIYVFQLMDHYTAIVSIMFLAFFEVVGVCWCYGVKRLSSNLV 451

  Fly   467 FMLGKRPTLYWRIVWQVVTPVIIIFILITSIVFIRTITYNNIPYPQWAIIIGWASCFTSVMWIPL 531
            .|.||||::::||.|.|:.|.:|..||:.|::..:...|.:..||.||..:||.....|::||||
Zfish   452 EMTGKRPSIFFRICWWVICPALITVILVFSVIQFKPARYEDYVYPPWAQGVGWLIALASIIWIPL 516

  Fly   532 YIFYIMIRKRATLCDSLKKRLKPLDWTPADPQDRAEYE 569
            ...:.:.....:..:..||.:.|..   .|..|...|:
Zfish   517 AAVHTLWVLPGSFTEKFKKSITPFS---LDEDDSPYYQ 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 206/536 (38%)
si:ch211-283g2.1XP_017211707.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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