DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and SLC6A20

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001372612.1 Gene:SLC6A20 / 54716 HGNCID:30927 Length:603 Species:Homo sapiens


Alignment Length:627 Identity:193/627 - (30%)
Similarity:317/627 - (50%) Gaps:112/627 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMVILAGIPLFYMEILIG 85
            ::.|..|.:..:|:.:.:.||:|:||||||||||...||.:||:||::|:|:.|:||.|:|:.:|
Human     2 EKARPLWANSLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVEGMPLLYLELAVG 66

  Fly    86 QFSSTGCTGMFR-MTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCFFKKVPWEDCSNSWN 149
            |....|..|.:| ::|.|.|.|:|.|||:.:...||:||.::....:|:.|...:||..|..:.|
Human    67 QRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWAFWYLFHSFQDPLPWSVCPLNGN 131

  Fly   150 ----TDDCVTASDMGKQNSSDVFKTSADEFFHLEVLRISTDISDLGGMVWEQLTALIITWIIIYF 210
                .::|..||             |...|::.:.|.||..:.:.||:.||....|::.|:::|.
Human   132 HTGYDEECEKAS-------------STQYFWYRKTLNISPSLQENGGVQWEPALCLLLAWLVVYL 183

  Fly   211 CLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYPEWHRLLDL---------- 265
            |::||.:|.|||||||...||.:|.|.||||.||.||..|:.:...|:....|.|          
Human   184 CILRGTESTGKVVYFTASLPYCVLIIYLIRGLTLHGATNGLMYMFTPKGSSALSLLAFQIEQLAN 248

  Fly   266 -KVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSVLGF-- 327
             |.|.:||.|:||.:|.|:|.::..||::...||.:..::::..||.|||:.|..|.||:.||  
Human   249 PKAWINAATQIFFSLGLGFGSLIAFASYNEPSNNCQKHAIIVSLINSFTSIFASIVTFSIYGFKA 313

  Fly   328 ------------------------------LSEKSG-------------------IPVES---VA 340
                                          |.:..|                   ..:||   .|
Human   314 TFNYENCLKKVSLLLTNTFDLEDGFLTASNLEQVKGYLASAYPSKYSEMFPQIKNCSLESELDTA 378

  Fly   341 TGGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIMSSILDEWYWVRSH--KC 403
            ..|.||||:.|.|||..:.|.|||::::||||.:|||.|:.....||::.:.|... :.||  |.
Human   379 VQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLMLGIGSMLGNTAAILTPLTDSKI-ISSHLPKE 442

  Fly   404 KLTLISCLIFLGLSSIMCTNGGMFILQLFDWYSSAIAVIVICLVEIIMVAWIYGIKNFMLDVEFM 468
            .::.:.||:...:..:.....|.:...:|:.|::.:::::|.|||.|.|.::||::.|..|::.|
Human   443 AISGLVCLVNCAIGMVFTMEAGNYWFDIFNDYAATLSLLLIVLVETIAVCYVYGLRRFESDLKAM 507

  Fly   469 LGKRPTLYWRIVWQVVTPVIIIFILI---TSIVFIRTITYN----------NIPYPQWAIIIGWA 520
            .|:..:.||:::|..|:|::|:.:.:   :..:...|:.|.          ...||.:|:.:...
Human   508 TGRAVSWYWKVMWAGVSPLLIVSLFVFYLSDYILTGTLKYQAWDASQGQLVTKDYPAYALAVIGL 572

  Fly   521 SCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLKPLDWTPADP 562
            ...:|.|.|||          |.|...:::|||..|   |||
Human   573 LVASSTMCIPL----------AALGTFVQRRLKRGD---ADP 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 188/614 (31%)
SLC6A20NP_001372612.1 SLC6sbd_SIT1 2..588 CDD:271401 186/609 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.