DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ntl and slc6a1b

DIOPT Version :10

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001007363.1 Gene:slc6a1b / 492490 ZFINID:ZDB-GENE-041114-57 Length:600 Species:Danio rerio


Alignment Length:565 Identity:221/565 - (39%)
Similarity:355/565 - (62%) Gaps:30/565 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NQPPTTN--------ATRKDKRIERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGA 60
            |:.||.|        ..:|.|.:   .:|..|:.|.:|:||.:|||||:||||||||||.::||.
Zfish    18 NEAPTANDKPKTLVVKVQKKKEL---PDRETWQGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGG 79

  Fly    61 AFLIPYLLMVILAGIPLFYMEILIGQFSSTGCTGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIIS 125
            ||||||.|.:|.||:|||::|..:||::|.|..|::::.|:.||.|:|..|::.:...||.|||:
Zfish    80 AFLIPYFLTLIFAGVPLFFLETALGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIA 144

  Fly   126 YPIRMIFYCFFKKVPWEDCSNSWNTDDC---VTASDMGKQNSSDVFKTSADEFFHLEVLRISTDI 187
            :.|..::..|...:||:.|.|.||||.|   .:.:::|...|:.|      ||:...:.:::..:
Zfish   145 WAIYYLYNSFTTDLPWKSCDNPWNTDKCFSNYSMANIGNMTSAVV------EFWERNMHQLTDGL 203

  Fly   188 SDLGGMVWEQLTALIITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIK 252
            ...|.:.......|.|.|:::|||:.:|:...||||||:..:||.:||||.|||.|||||.:||.
Zfish   204 EKPGEIRLPLAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYFMLFILFIRGVTLPGAKEGIL 268

  Fly   253 FYLYPEWHRLLDLKVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLA 317
            ||:.||:.:|.:.:||.|||.|:||..|.|.|.::.:.|::.|.||...||:::..||.|||:.|
Zfish   269 FYVTPEFSKLKESEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYKDSIIVCCINSFTSMFA 333

  Fly   318 GFVVFSVLGFLSEKSGIPVESVATGGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFV 382
            |||:||::||::..:..|:..||..|.||||:.||||:..||:..|||::||.||.:|||||.|.
Zfish   334 GFVIFSIVGFMAHITKRPIADVAASGPGLAFLAYPEAVTQLPISPLWAVLFFSMLLMLGIDSQFC 398

  Fly   383 QLEAIMSSILDEW-YWVRSHKCKLTLISCLI--FLGLSSIMCTNGGMFILQLFDWYS-SAIAVIV 443
            .:|..:::::||: ..:|..:.....:.||:  .:|||:|  |.||:::.:|||:|| |.:.::.
Zfish   399 TVEGFITALVDEFPRALRGRREIFIAVVCLVSYLIGLSNI--TQGGLYVFKLFDYYSASGMCLLF 461

  Fly   444 ICLVEIIMVAWIYGIKNFMLDVEFMLGKRPTLYWRIVWQVVTPVIIIFILITSIVFIRTITYNNI 508
            :...|.:.::|.||:..|..::|.|:|.:|.::|::.|.|.||:|:..:.:.|.|.:..:|.||.
Zfish   462 LVFFECVSISWFYGVNKFYGNLEEMIGYKPCIWWKLCWVVFTPLIVAGVFLFSAVQMVPLTLNNY 526

  Fly   509 PYPQWAIIIGWASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLK 553
            .:|:|...:||....:|::.||.|:.|:.:    ||..|.|:||:
Zfish   527 VFPKWGQGVGWCMALSSMVLIPGYMGYMFL----TLKGSYKERLR 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:444915 215/537 (40%)
slc6a1bNP_001007363.1 SLC5-6-like_sbd 2..600 CDD:444915 221/565 (39%)

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