DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ntl and slc6a1b

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001007363.1 Gene:slc6a1b / 492490 ZFINID:ZDB-GENE-041114-57 Length:600 Species:Danio rerio


Alignment Length:565 Identity:221/565 - (39%)
Similarity:355/565 - (62%) Gaps:30/565 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NQPPTTN--------ATRKDKRIERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGA 60
            |:.||.|        ..:|.|.:   .:|..|:.|.:|:||.:|||||:||||||||||.::||.
Zfish    18 NEAPTANDKPKTLVVKVQKKKEL---PDRETWQGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGG 79

  Fly    61 AFLIPYLLMVILAGIPLFYMEILIGQFSSTGCTGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIIS 125
            ||||||.|.:|.||:|||::|..:||::|.|..|::::.|:.||.|:|..|::.:...||.|||:
Zfish    80 AFLIPYFLTLIFAGVPLFFLETALGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIA 144

  Fly   126 YPIRMIFYCFFKKVPWEDCSNSWNTDDC---VTASDMGKQNSSDVFKTSADEFFHLEVLRISTDI 187
            :.|..::..|...:||:.|.|.||||.|   .:.:::|...|:.|      ||:...:.:::..:
Zfish   145 WAIYYLYNSFTTDLPWKSCDNPWNTDKCFSNYSMANIGNMTSAVV------EFWERNMHQLTDGL 203

  Fly   188 SDLGGMVWEQLTALIITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIK 252
            ...|.:.......|.|.|:::|||:.:|:...||||||:..:||.:||||.|||.|||||.:||.
Zfish   204 EKPGEIRLPLAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYFMLFILFIRGVTLPGAKEGIL 268

  Fly   253 FYLYPEWHRLLDLKVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLA 317
            ||:.||:.:|.:.:||.|||.|:||..|.|.|.::.:.|::.|.||...||:::..||.|||:.|
Zfish   269 FYVTPEFSKLKESEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYKDSIIVCCINSFTSMFA 333

  Fly   318 GFVVFSVLGFLSEKSGIPVESVATGGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFV 382
            |||:||::||::..:..|:..||..|.||||:.||||:..||:..|||::||.||.:|||||.|.
Zfish   334 GFVIFSIVGFMAHITKRPIADVAASGPGLAFLAYPEAVTQLPISPLWAVLFFSMLLMLGIDSQFC 398

  Fly   383 QLEAIMSSILDEW-YWVRSHKCKLTLISCLI--FLGLSSIMCTNGGMFILQLFDWYS-SAIAVIV 443
            .:|..:::::||: ..:|..:.....:.||:  .:|||:|  |.||:::.:|||:|| |.:.::.
Zfish   399 TVEGFITALVDEFPRALRGRREIFIAVVCLVSYLIGLSNI--TQGGLYVFKLFDYYSASGMCLLF 461

  Fly   444 ICLVEIIMVAWIYGIKNFMLDVEFMLGKRPTLYWRIVWQVVTPVIIIFILITSIVFIRTITYNNI 508
            :...|.:.::|.||:..|..::|.|:|.:|.::|::.|.|.||:|:..:.:.|.|.:..:|.||.
Zfish   462 LVFFECVSISWFYGVNKFYGNLEEMIGYKPCIWWKLCWVVFTPLIVAGVFLFSAVQMVPLTLNNY 526

  Fly   509 PYPQWAIIIGWASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLK 553
            .:|:|...:||....:|::.||.|:.|:.:    ||..|.|:||:
Zfish   527 VFPKWGQGVGWCMALSSMVLIPGYMGYMFL----TLKGSYKERLR 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 215/537 (40%)
slc6a1bNP_001007363.1 SLC5-6-like_sbd 2..600 CDD:294310 221/565 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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