DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and Gat

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster


Alignment Length:603 Identity:230/603 - (38%)
Similarity:364/603 - (60%) Gaps:34/603 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANNQPPTTNATRKDK--RIERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFL 63
            :.::.|.||:.:.|.:  :||:..:||.|.||.:||||::|.|||:|||||||||||::||.||:
  Fly    33 LQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFI 97

  Fly    64 IPYLLMVILAGIPLFYMEILIGQFSSTGCTGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIISYPI 128
            :||::.:.|||||:|:||:.:||..:.|..|:|::.|:.||.|.|..|::.:...||.||:::.:
  Fly    98 LPYIITLFLAGIPMFFMELALGQMLTIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAV 162

  Fly   129 RMIFYCFFKKVPWEDCSNSWNTDDCVTASDMGKQN-----------SSDVFKTSA---------- 172
            ...|......|||..|:|.|||.:||  |...::|           :..|...||          
  Fly   163 FYFFMSMRADVPWRTCNNWWNTVNCV--SQYERKNLHCWDKIINGTTQKVCSVSALNITSLELTD 225

  Fly   173 --DEFFHLEVLRISTDISDLGGMVWEQLTALIITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLF 235
              .||:....|:||..|.::|.:.||....|::.||:.|||:.:|:|..|||||||..|||:||.
  Fly   226 PVKEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLT 290

  Fly   236 ILLIRGATLPGAWKGIKFYLYPEWHRLLDLKVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAK 300
            |||:||.|||||.:|||||:.|.:.:|.:.:||.||..|:||..|.|.|.:|.:.|::.|.||..
  Fly   291 ILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVY 355

  Fly   301 CDSVLIVSINVFTSLLAGFVVFSVLGFLSEKSGIPVESVATGGAGLAFVTYPEAIALLPVPQLWA 365
            .|::::.::|..||:.||||:|||:||::.:...||..||..|.||||:.||.|:..||...:|:
  Fly   356 KDALIVCTVNSSTSMFAGFVIFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWS 420

  Fly   366 LMFFFMLFLLGIDSVFVQLEAIMSSILDEW-YWVRSHKCKLTLISCLI--FLGLSSIMCTNGGMF 427
            .:|||||.|:|:||.|..:|..:::|:||| ..:|..|.....|.|.:  .:||:.|  |.|||:
  Fly   421 CLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIVCALSYLVGLTCI--TQGGMY 483

  Fly   428 ILQLFDWYS-SAIAVIVICLVEIIMVAWIYGIKNFMLDVEFMLGKRPTLYWRIVWQVVTPVIIIF 491
            |.|:.|.|: |...::.:...|.:.::|.||:..|...::.|:|..||::|:..|.|.||.|.:.
  Fly   484 IFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLG 548

  Fly   492 ILITSIVFIRTITYNNIPYPQWAIIIGWASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLKPLD 556
            :...:||....:.|.:..||.||...||.:..:|:::||||:|::..|....|.:.::..:: :|
  Fly   549 VFFFNIVQWTPVKYLDYSYPWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVR-ID 612

  Fly   557 WTPADPQDRAEYEAFRRQ 574
            ......:::...||:.::
  Fly   613 EDVTRLREKMLREAYAKE 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 221/556 (40%)
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 221/557 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440717
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2610
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.800

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