DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and List

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster


Alignment Length:563 Identity:208/563 - (36%)
Similarity:326/563 - (57%) Gaps:24/563 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RKDKRIERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMVILAGIPL 77
            :.:|..|:...  ||.:..||:.|.:..::|:||:|||||:.:::||..|:||||:.:::.|.|:
  Fly     9 KSEKPAEKPAE--QWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPV 71

  Fly    78 FYMEILIGQFSSTGCTGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCFFKKVPWE 142
            :|:||.:|||:..|....|.|.|||||..:.||:..|..:.|||.|::..:|.....|..::||.
  Fly    72 YYLEISLGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWS 136

  Fly   143 DCSNSWNTDDCVTASDMGKQNSSDVFKTSADEFFHLEVLRISTDISD-LGGMVWEQLTALIITWI 206
            .|..||.||    ..|...||||... :.|..:|..|:|....:|.: |....|:.:..|.|.|:
  Fly   137 RCWESWGTD----CHDGNAQNSSGKM-SPAQLYFEREILHEVPNIDNGLSLPNWQLVACLAIAWL 196

  Fly   207 IIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYPEWHRLLDLKVWADA 271
            :|...|:|||||.||..||...|||::|.|||:|..|||||..||.::..|:|..||:..||..|
  Fly   197 VIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYAA 261

  Fly   272 AVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSVLGFLSEKSGIP- 335
            ..|:||.:...:|.::..||:::|..|...|.|:|.:::..:|::||.:.|.:||.|:.::|.| 
  Fly   262 VTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETGNPD 326

  Fly   336 VESVATGGAGLAFVTYPEAIALLP-VPQLWALMFFFMLFLLGIDSVFVQLEAIMSSILDEWYWVR 399
            :.||..|||||||::||||||... |||::|::||.|||:|||.|.......|:..|.|: :.:|
  Fly   327 IGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQ-FGLR 390

  Fly   400 SHKCKLTLISCLIFLG--LSSIMCTNGGMFILQLFDWYSSAIAVIVICLVEIIMVAWIYGIKNFM 462
            |... ..|.|.|..||  :|.:..|.||.|||.|.|:|..:...:::.:.|::.||||||:..|.
  Fly   391 SPPI-WKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRFC 454

  Fly   463 LDVEFMLGKRPTLYWRIVWQVVTPVIIIFILITSIVFIRTITYNNIPYPQWAIIIGWASCFTS-- 525
            .|::||:|.....|||:.|:.:||.::..:||..::.:..:.|..:.||..|.:.|   ||.:  
  Fly   455 EDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLAHVFG---CFLATL 516

  Fly   526 -VMWIPLYIFYIMIRKR---ATLCDSLKKRLKPLD-WTPADPQ 563
             ::.:|.:..|.:.:||   .:....::...||.| |.||:.|
  Fly   517 GLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWGPANVQ 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 199/540 (37%)
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 188/478 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440758
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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