DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and slc6a19b

DIOPT Version :10

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_956030.1 Gene:slc6a19b / 326030 ZFINID:ZDB-GENE-030131-4755 Length:651 Species:Danio rerio


Alignment Length:574 Identity:187/574 - (32%)
Similarity:305/574 - (53%) Gaps:82/574 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KRIERDE--NRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMVILAGIPLF 78
            :|:|.:|  :|.:|.:|::::|:.:|:.:|:||||||||||...||.||:||:|::::..||||.
Zfish    23 ERLEVEEAGDRPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVFEGIPLL 87

  Fly    79 YMEILIGQFSSTGCTGMFR-MTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCFFKKVPWE 142
            ::|..|||....|..|::| :.|.:.|.|||.:.|:.....||:.||::.:...|..|...:||.
Zfish    88 HLEFAIGQRLRKGSVGVWRTINPYMLGVGIASMCVSFLVSLYYNTIIAWVMWYFFNSFQDPLPWS 152

  Fly   143 DCSNSWNTDDCVTASDMGKQNSSDVFKTSADEFFHLEVLRISTDISDLGGM-VWEQLTALIITWI 206
            .|..:.|....:  .:.||  ||.|     |.|::.|.|..|..|.|.||: || .:..||..|.
Zfish   153 QCPINENRTGPI--PECGK--SSPV-----DYFWYRETLNTSAAIDDTGGLQVW-MVLCLISAWA 207

  Fly   207 IIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYPEWHRLLDLKVWADA 271
            ::|.|.:|||::.||.||.|...|||:|.|.||||.||.|:..||||...|:.:.|.:...|.||
Zfish   208 VLYVCCIRGIETTGKAVYVTSTLPYLVLTIFLIRGLTLKGSVDGIKFLFTPDINELANPSTWLDA 272

  Fly   272 AVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSVLGF--------- 327
            ..|:|:.....:||:::.:|::|..||.:.|:|:|..||.|||:.|..|::|::||         
Zfish   273 GAQVFYSFSLAFGGLISFSSYNSVHNNCEQDAVIISVINAFTSIYAATVIYSIIGFRATERFDDC 337

  Fly   328 ------------------------------LSEKSGIPVESVA-------------TGGAGLAFV 349
                                          |:..|...:.|::             ..|.||||:
Zfish   338 MNGNILTLLNTFDLPEGFINQSNYQDVFQSLNSTSPDIISSLSLKTCDLNNFLSEGVEGTGLAFI 402

  Fly   350 TYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIMSSILDEWYWVRS-HKCKLTLISCLIF 413
            .:.|||..:|:..||:::||.|||.||:.|:|..:|.::..:.|...:.:| .|..::.::||:.
Zfish   403 VFTEAITKMPLSPLWSVLFFIMLFCLGLSSMFGNIEGVLVPLQDLGVFPKSWPKEIISGVTCLVC 467

  Fly   414 LGLSSIMCTNGGMFILQLFDWYSSAIAVIVICLVEIIMVAWIYGIKNFMLDVEFMLGKRPTLYWR 478
            ..:..|.....|.:.|.|||.::.:|.:::|...|:|.|.::|||..|..|:.||:|.:|.::|:
Zfish   468 CLVGLIFVQGSGNYWLALFDSFAGSIPLLIIAFSEMIGVVYVYGIDRFNEDLIFMIGHKPNIFWQ 532

  Fly   479 IVWQVVTPVII--IFILITSIVFIRTITYN-------------NIPYPQWAIII 517
            ..|:.::|:|:  ||:...|....:.|.|:             ..|||.|..:|
Zfish   533 ATWRFISPLIMLAIFVFYFSTTVTKEIFYSAWDPESENFPTLEKKPYPTWIYVI 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:444915 184/564 (33%)
slc6a19bNP_956030.1 SLC6sbd_B0AT1 33..613 CDD:212085 184/564 (33%)

Return to query results.
Submit another query.