DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and F56F4.3

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_491770.3 Gene:F56F4.3 / 186398 WormBaseID:WBGene00018980 Length:701 Species:Caenorhabditis elegans


Alignment Length:641 Identity:130/641 - (20%)
Similarity:258/641 - (40%) Gaps:106/641 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PTTNATRKDKRIERDE------NRGQWKSKSEFILSLLGYAIG-IGNVWRFPYLCYRSGGAAFLI 64
            ||.|......:||.:|      :|...:..:...||||...:. :.|...|....:..||..|.:
 Worm    78 PTGNPNLNPSKIEAEELEQEIGSRNISRPSTYRQLSLLLSCVTLLKNNMVFIECFFNHGGVYFFV 142

  Fly    65 PYLLMVILAGIPLFYMEILIGQFSSTGCTGMF-RMTPLLKGTGIAQVVVNAYCV-CYYSVIISYP 127
            ||.:::.:.|:|:...|:.:.||||....||| ||.|:|  .||..:::   |: ..|:|.|::.
 Worm   143 PYFIILFVLGVPMAIFELSLAQFSSIPMNGMFTRMAPML--GGIPWLIL---CLRIIYTVYIAFD 202

  Fly   128 IRMIFYCFFKKVP-------WEDCSN---------SWN--------TDDCVTASDMGKQNSSDVF 168
            .|.:.|.:...|.       |..|.:         :|:        ..:||....:.|......:
 Worm   203 PRFLLYAYKSFVTVITGNMNWIHCDDYKGVRCFDPTWSCKINEFRLNGECVKDVHIRKLAQQQDY 267

  Fly   169 KTSADEFFHLEVLRISTDI-----SDLGGM-VWEQLTALIITWIIIYFCLMRGIKSVGKVVYFTV 227
            ....  :|.|...|:.:.|     .::.|: :.:.:.|.::..:|..|...:|.:....:..|.|
 Worm   268 GLLT--YFGLREYRLISIIPSQIYKEINGLDIMDNILAALVFLLIAGFITYKGHRFFASLAGFFV 330

  Fly   228 PFPYLLLFILLIRGATLPGAWKGIKFYLYP-----EWHRLLDLKVWADAAVQMFFGIGPGWGGIV 287
            ..|.|.:...:|......|:.|  |.:...     :..::.:|..|.:||......:....|.::
 Worm   331 FLPILGMIPAVILVYYDVGSRK--KHFFNQILKNNDITKIFELSAWLNAARVTVKTVYIADGTLM 393

  Fly   288 NMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSVLGFLSEKSGIP-VESVATGGAGLAFVTY 351
            .:.|.:.||:|...|:||:.:......||..|.:..:| :::.....| .::|...|..:.|...
 Worm   394 ALGSRADFRHNFIKDAVLLAASGATYRLLLCFGILPIL-YVANDILYPFAKTVYARGDLVQFHAI 457

  Fly   352 PEAIALLP---VPQLWALMFFFMLFLL--GIDSVFVQLEAI--------MSSILDEWYWVRSHKC 403
            ....:.||   :|.:...:.||:..:|  .|:..||..:.|        :..:.....:::....
 Worm   458 ELFFSALPSYAIPGISPTVTFFVYAMLYGTINFAFVAYQVITFEMLINALHHLFPRLLYLKQKSV 522

  Fly   404 KLTLI----SCLIFLGLSSI---MCTNGGMFILQLFDWYSSAIAVIVICLVEIIMVAWIYGIKNF 461
            ::.:|    :.|:||.:.|:   ....|....|.:.|:....::..|  .:::|.|:.:||.|..
 Worm   523 RICIIMATVTLLLFLYILSLPYKQLAVGYQKELAIDDYVVGLVSTTV--FIQLISVSIVYGYKRL 585

  Fly   462 MLDVEFMLGKRPTLY---------WRIVWQVVTPVIIIFILITSIVFIRTITYNNIPYPQWAIII 517
            :::...||...|..|         ..::|....|:..: :.|.||:..:...|:      |.:::
 Worm   586 LINFLTMLKHHPVTYKLVEKCRVFLYVMWAFFLPISCL-VSICSIIVKKYQIYH------WPLVL 643

  Fly   518 GWASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLKPLD----WTPADPQDRAEYE 569
                 :.::..:||    |.:.::.|:....|:.:..|.    |.||:.....|.|
 Worm   644 -----YAAISALPL----IYLARKLTMYIMRKEFVSGLSQTHRWQPANEGHAREVE 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 118/597 (20%)
F56F4.3NP_491770.3 SLC5-6-like_sbd 73..620 CDD:382020 113/553 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159212
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.