DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ntl and snf-12

DIOPT Version :10

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_509527.1 Gene:snf-12 / 181143 WormBaseID:WBGene00004911 Length:1022 Species:Caenorhabditis elegans


Alignment Length:614 Identity:183/614 - (29%)
Similarity:317/614 - (51%) Gaps:69/614 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMVILAGIPLFYMEIL 83
            ::::.|..|:::.:|.||.||:.:|:|:..|||...|:.||..|.||||..:|..|:||.::.:.
 Worm   152 KQNDRRELWRTQKDFFLSCLGFMVGVGHTMRFPAKVYQHGGGVFFIPYLFSLIFFGLPLVFLHLS 216

  Fly    84 IGQFSSTGCTGMF-RMTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCFFK---------K 138
            :||::.......| |:.|:..|.|.|.||:......||::|:::.|    :.||:         :
 Worm   217 LGQYTGQAANTAFQRLMPIGSGVGWALVVIAIPVAVYYNIIVAWAI----HYFFQSAKGLLLGDE 277

  Fly   139 VPWEDCSNSWNTDD-CVTASDMGKQNSSDVFKTSADEFFHLEVLRIST--DISDLGGMVWEQLTA 200
            :|||.|.:.|..|: |....::....:|....|:.:.|||.|||.:||  |.: ||.:....:.:
 Worm   278 LPWETCRDEWQLDNRCCNLHNLHSCFNSTNSITAPEAFFHSEVLSLSTFGDFA-LGPLQSHLVLS 341

  Fly   201 LIITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYPEWHRLLDL 265
            |...|::::|.:.:|:.|:.:.:..|...|||||.|||:||.:||||.||:.|....:..:|...
 Worm   342 LAAAWLLVFFGVFKGLGSIAQTMNVTATVPYLLLSILLLRGISLPGANKGLTFLFTVDSTKLWKW 406

  Fly   266 KVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSVLGFLSE 330
            ::|..||.|:|:.:|...|.:::||:||.:|||...||||:|.::..||.|:|.|:||.:||::.
 Worm   407 QIWKSAAEQVFYELGIDAGPLISMAAFSRYRNNIYRDSVLLVIMDALTSCLSGMVIFSFVGFIAS 471

  Fly   331 KSGIPVESVAT-GGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIMSSILDE 394
            :|...|..|.. ....|:|..||...:.:....|||.:||.||.|..||:.|..||.|.|:.:: 
 Worm   472 ESNSNVNDVLKHDPLYLSFTVYPGVTSFMYWGGLWATLFFGMLVLAAIDAEFAWLEMIASAFMN- 535

  Fly   395 WYWVRSHKC---KLTLISCL--IFLGLSSIMCTNGGMFILQLFD-----WYSSAIAVIVICLVEI 449
             ::...:|.   :|....||  .||||.  :|..||:|:....:     |.|.::|     |:.:
 Worm   536 -HFSMKNKAVENRLLAFLCLAGFFLGLP--LCAQGGIFVFHAIENLNANWNSFSLA-----LLSV 592

  Fly   450 IMVAWIYGIKNFMLDVEFML-------GKRPTLYWRIVW-------------QVVTPVIIIFILI 494
            .:|.::|||.|::.|:..||       .|...|..::::             ..:.|||:..:|:
 Worm   593 AIVCYVYGIDNYLTDISAMLRVPRIQISKATRLKEKLIYFFGPGGIYIKFSLCFICPVILTVLLV 657

  Fly   495 TSIVFIRTITYNNIPYPQWAIIIGWASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLKPLDWTP 559
            .|::..:.|::...|.|....|:.|......::.:|| :.::.||:.......||......:|..
 Worm   658 ASVLGYQRISFAGRPIPIDYEIVAWIVMIGPLLVVPL-VAFMQIRQIRNEGKLLKSLFDTSEWRE 721

  Fly   560 A-----DPQD-----RAEYEAFRRQRRMP 578
            :     :|:|     ..::|:...:||.|
 Worm   722 SQDDSLEPKDLYMRQSGKFESPPNRRRTP 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:444915 176/573 (31%)
snf-12NP_509527.1 SLC6sbd 158..660 CDD:271359 163/515 (32%)

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