DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ntl and snf-9

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_503077.2 Gene:snf-9 / 178512 WormBaseID:WBGene00004908 Length:713 Species:Caenorhabditis elegans


Alignment Length:679 Identity:201/679 - (29%)
Similarity:334/679 - (49%) Gaps:105/679 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PTTNATRKDKRI-----------------ERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLC 54
            |:.::..:|:||                 :.|..||.|.::.||:||.||.|:|:||:||||...
 Worm    17 PSDSSAAEDQRIATTIVRDSGSSKEIEESQADPCRGAWGNQIEFLLSTLGMAVGLGNIWRFPTRA 81

  Fly    55 YRSGGAAFLIPYLLMVILAGIPLFYMEILIGQFSSTGCTGMF-RMTPLLKGTGIAQVVVNAYCVC 118
            |.:||:|||:||:...:|.|:|..|:|.|:||:..|....:| |..|:|:|.|...|.|::....
 Worm    82 YNNGGSAFLVPYVACALLFGLPAVYLEFLLGQYHRTTAPIIFRRFAPILQGVGWMAVAVSSLVAI 146

  Fly   119 YYSVIISY-PIRMIFYCFFKKVPWEDCSNSW-NTDDCVTASDMGKQ------------------- 162
            ||.:||.: .:.|..........|..|.||| |.:.||   |.|.|                   
 Worm   147 YYIIIIGWSTVYMASIVMGHTSKWNRCGNSWNNAESCV---DSGLQPLCASFNATGNETSPVWAN 208

  Fly   163 -------------NSS-------DVFKT----SADEFFHLEVLRISTDISDLGGMVWEQLTALII 203
                         |:|       :..||    :.:::|...|::.:....:...:.::....:..
 Worm   209 LSSEGRGKFYIYLNTSCYDKVDLEFNKTKMIAATEQYFFDYVVKPTDGFLEFSSINFKSFFGMNA 273

  Fly   204 TWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYL-YPEWHRLLDLKV 267
            .|:|:...|.:|:..:||..|..|..||.::.:|..||.||.||..||.:|| .|:|.::.....
 Worm   274 CWLIVVLILWKGVGYMGKASYVIVTLPYFIIILLFFRGITLDGAEDGIYYYLGNPDWSKVFMPAT 338

  Fly   268 WADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSVLGFLSEKS 332
            |.:|..|:.|.:|.|:||::.|||||...||...|:::::..:...||:.|..|||.||||::|.
 Worm   339 WGEALKQLCFSLGIGYGGLIGMASFSKPNNNCFRDALIVIIGDTMMSLVGGAAVFSTLGFLAKKK 403

  Fly   333 GIPVESVATGGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIMSSILDEWYW 397
            |..|..|...|..||||.:|||:..:|:|:||:.:||.|||.|||.:....:....|||.|::..
 Worm   404 GCSVAEVVNDGFSLAFVAFPEALGRMPLPELWSFLFFLMLFFLGISTEVAYVNVFCSSICDQFVN 468

  Fly   398 VRSHKCKLTLISCLIFLGLSSIMCTNGGMFILQLFDWYSSAIAVIVICLVEIIMVAWIYGIKNFM 462
            :|..|..:.::.||:...|..:|.|:||.:...:||.|::.::.......|:::||::||.:|.:
 Worm   469 LRKRKWLVAVLWCLVLYVLGVVMVTDGGFYWFIMFDEYAAGVSSCCAVTAEVLIVAYVYGRRNQL 533

  Fly   463 LDVEFMLGK----------RPTLYWRIVWQVVTPVI-IIFILITSIVFIRTITYNNIP--YPQWA 514
            .|::.|.|:          :.:.|:...|..||||: .|.|::.||......|..|.|  ||...
 Worm   534 ADMKEMFGESKNKCTSWIGQHSPYFGFNWMFVTPVLGSILIVLASIRQYPYQTDENKPNMYPLAF 598

  Fly   515 IIIGWASCFTSVMWIPLYIF--YIMIRKRATLCDSL---KKRLKPLD--WTPADPQDRAEYEAFR 572
            .|:|||.|...:..:|::.|  ::..:::.....:|   :::||...  :.....:|||      
 Worm   599 DIVGWAVCLLPMALVPIFAFCAFVEFKRKGHDLRALFMKQRQLKSFGRIYQTMASKDRA------ 657

  Fly   573 RQRRMPG------------FMSDTDMESS 589
            :|:.:|.            |::..|.:||
 Worm   658 KQKILPDREPWDDAPTGHQFVASPDFQSS 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 186/594 (31%)
snf-9NP_503077.2 SLC6sbd 52..577 CDD:271359 169/527 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2610
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.870

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