DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and dat-1

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_499043.1 Gene:dat-1 / 176304 WormBaseID:WBGene00000934 Length:615 Species:Caenorhabditis elegans


Alignment Length:572 Identity:209/572 - (36%)
Similarity:334/572 - (58%) Gaps:29/572 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMVILAGIPLFYMEILI 84
            :|..|.||..|.:|:||::|:|:.:||:|||||||:::||..|||||.:||:|.|:||||||:.:
 Worm    36 KDPAREQWSGKLDFLLSVVGFAVDLGNIWRFPYLCFKNGGGVFLIPYSIMVLLTGVPLFYMELCL 100

  Fly    85 GQFSSTGC-TGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCFFKKVPWEDCSNSW 148
            ||:...|. |...|:.||.||.|...::...|...:|:||:::.:..::..|...:||..|:||:
 Worm   101 GQYYRKGAITTWGRICPLFKGIGYCVILTAFYVDFFYNVILAWGLHYLYTSFSFNLPWASCNNSY 165

  Fly   149 NTDDCV--------TASDMGKQNSSDVFKTS-ADEFFHLEVL----------RISTDISDLGGMV 194
            |:..|.        ||.......|....|.| |:|:|:...|          .:...::|||.:.
 Worm   166 NSPACYEPHWSEDGTAMCRSANQSVSAEKISAAEEYFYKGFLGLHEANAPNSHVIRSVTDLGNVR 230

  Fly   195 WEQLTALIITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYPEW 259
            |:...:|.:.::|.||.:.:||.:.||||:||..|||::|.||.|||.||||...||::||.|.:
 Worm   231 WDIALSLFVVYLICYFSMWKGIHTSGKVVWFTALFPYVVLGILFIRGVTLPGWQNGIEYYLRPNF 295

  Fly   260 HRLLDLKVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSV 324
            ..|....||.|||.|:||.:|||:|.::..:|::.|.||...|::....||..||.|:|||:|||
 Worm   296 EMLKRPSVWQDAATQVFFSLGPGFGVLMAYSSYNDFHNNVYVDALFTSFINCATSFLSGFVIFSV 360

  Fly   325 LGFLSEKSGIPVESVATGGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIMS 389
            ||::|.|||.|:|:||..|.||.||.||||::.:|....|:::||.||..||:||.|...|||::
 Worm   361 LGYMSCKSGKPIEAVAQEGPGLVFVVYPEALSTMPYAPFWSVLFFLMLMTLGLDSSFGGSEAIIT 425

  Fly   390 SILDEWYWVRSHKCKLTLISCL--IFLGLSSIMCTNGGMFILQLFDWYSSAIAVIVICLVEIIMV 452
            .:.||:..::  |.:...:.||  .::.:...|||.||:.|::....|.:...:::....|.:::
 Worm   426 GLSDEFPILK--KNREVFVGCLFAFYMVIGIAMCTEGGILIMEWLIIYGTTWGLLIAVFCEAMVI 488

  Fly   453 AWIYGIKNFMLDVEFMLGKRPTLYWRIVWQVVTPVIIIFILITSIVFIRTITYNNIPYPQWAIII 517
            |:|||::.|:.||:.|:|.||..||:..|....|.|::.::.::.:..:.:||.:..||..|.:|
 Worm   489 AYIYGLRQFVHDVKEMMGFRPGNYWKFCWSCAAPFILLSMITSNFINYQALTYQDYTYPTAANVI 553

  Fly   518 GWASCFTSVMWIPLYIFYIMIRKRA-TLCDSLKKRLKPLDWTPADPQDRAEY 568
            |.....:...:|||...|..:..|. |:.:..::...|....|    ::.||
 Worm   554 GIIFALSGASFIPLVGIYKFVNARGNTISEKWQRVTMPYRKRP----NQTEY 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 204/552 (37%)
dat-1NP_499043.1 SLC6sbd_SERT-like_u1 40..591 CDD:271405 204/552 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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