DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and snf-5

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_496735.1 Gene:snf-5 / 174923 WormBaseID:WBGene00004904 Length:728 Species:Caenorhabditis elegans


Alignment Length:589 Identity:177/589 - (30%)
Similarity:296/589 - (50%) Gaps:54/589 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NNQPPTTNATRKDKRIERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYL 67
            |....||..|......|.:|.|..:.:..||:|:.||.|:|:||:||||...|.:||:|||||||
 Worm    61 NTTVTTTRPTLDTPPEEEEEKRDGFGNSFEFVLTSLGLAVGLGNIWRFPTRAYNNGGSAFLIPYL 125

  Fly    68 LMVILAGIPLFYMEILIGQFSSTGCTGMF-RMTPLLKGTGIAQVVVNAYCVCYYSVIISY-PIRM 130
            ....|.|:|..|.|.|.||:.......:| |:.|:|:|.|...|.|.|....||.||:|: .|.|
 Worm   126 TCAFLFGLPAVYFEFLTGQYQGKSPPVIFRRVRPILEGVGWMGVFVAALVAIYYIVIVSWISIYM 190

  Fly   131 IFYCFFKKVPWEDCSNSWNT-DDCVTASDM---------------------------------GK 161
            |..|......|..|:|.||. ..|:|.:|.                                 ..
 Worm   191 INICRGHFALWSHCNNDWNNGTSCITMADQYLCKNHTKVMANSTLWNSSLPIPDKMVYFNGACQD 255

  Fly   162 QNSSDVFKTSADEFFHLEVLRISTDISDLGGMVWEQLTALIITWIIIYFCLMRGIKSVGKVVYFT 226
            .|.:|| .|:.:::|...:::.|:.:.|.||..|....|:.:.|::....:::|.|.:||:.|.:
 Worm   256 ANGTDV-STATEQYFMTYIVQPSSGMLDFGGFNWPVFAAMSVCWLLTGLGILKGAKIMGKISYVS 319

  Fly   227 VPFPYLLLFILLIRGATLPGAWKGIKFYL-YPEWHRLLDLKVWADAAVQMFFGIGPGWGGIVNMA 290
            |..||:|:.:|.|.|....|:..|::.|. .|.:.:|.:...|.:|..|:.|.:..|.||:::::
 Worm   320 VLVPYVLVVVLFINGVFQDGSGVGLEMYFGTPNYTKLYEQDTWTEALKQLCFSLSVGHGGLISLS 384

  Fly   291 SFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSVLGFLSEKSGIPVESVATGGAGLAFVTYPEAI 355
            |:|..|||...|:::::..:...||:.|..||:.||:|::.:|..|:.|...|..||||.||||:
 Worm   385 SYSPKRNNIFRDALIVIIGDTTMSLVGGGAVFATLGYLAKATGQDVKDVVKSGLSLAFVVYPEAM 449

  Fly   356 ALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIMSSILDEWYWVRSHKCKLTLISCLIFLGLSSIM 420
            ..:|||.||..:||.||||||..:....::...|.|.|::...|:.|..:.:..|.:...:..:.
 Worm   450 TRMPVPWLWCFIFFLMLFLLGASTEIALVDVFCSCIYDQYPRFRNRKWIVVIAWCSVLYCIGLVF 514

  Fly   421 CTNGGMFILQLFDWYSSAIAVIVICLVEIIMVAWIYGIKNFMLDVEFMLGK----------RPTL 475
            .|..|.:..::||.|::..:.:...:.|::::.:|||.:|...|:..::|.          ..:.
 Worm   515 STRAGYYWFEMFDEYAAGFSSVCTVVCELLVMMYIYGFRNVRDDITEVVGHARNKFTGAIGAHSW 579

  Fly   476 YWRIVWQVVTPVIIIFILITSIVFIRTITY---NNIPYPQWAIIIGWASCFTSVMWIPLYIFYIM 537
            |:...|.|::|.|.  :::..:.|:|...|   ::| ||....|.||...|..|:.:|:::....
 Worm   580 YFTANWMVISPSIA--LILVGLSFVREYPYMGRHDI-YPAVFDIFGWFLSFLPVIIVPIFMLLNF 641

  Fly   538 IRKR 541
            ||.|
 Worm   642 IRCR 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 171/568 (30%)
snf-5NP_496735.1 SLC6sbd 83..601 CDD:271359 155/520 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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