DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ntl and Slc6a20

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_579830.1 Gene:Slc6a20 / 113918 RGDID:621651 Length:616 Species:Rattus norvegicus


Alignment Length:603 Identity:195/603 - (32%)
Similarity:310/603 - (51%) Gaps:90/603 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DKRIERD--ENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMVILAGIPL 77
            |::..||  :.|.||.:..:|:.:.:.||:|:||||||||||...||.:||:|||:|:|:.|:||
  Rat    18 DEKRARDMEKARPQWGNPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYLIMLIVEGMPL 82

  Fly    78 FYMEILIGQFSSTGCTGMFR-MTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCFFKKVPW 141
            .|:|:.:||....|..|.:| ::|.|.|.|:|.|||:.:...||:||.::....:|:.|...:||
  Rat    83 LYLELAVGQRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQDPLPW 147

  Fly   142 EDCS-NSWNT---DDCVTASDMGKQNSSDVFKTSADEFFHLEVLRISTDISDLGGMVWEQLTALI 202
            ..|. ||..|   ::|..||             |...|::.:.|.||..|.:.||:.||....|.
  Rat   148 SVCPLNSNRTGYDEECEKAS-------------STQYFWYRKTLNISPSIQENGGVQWEPALCLT 199

  Fly   203 ITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYPEWHRLLDLKV 267
            :.|:::|.|::||.:|.|||||||...||.:|.|.|:||.||.||..|:.:...|:..:|.:.|.
  Rat   200 LAWLMVYLCILRGTESTGKVVYFTALMPYCVLIIYLVRGLTLHGATNGLMYMFTPKIEQLANPKA 264

  Fly   268 WADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSVLGF----- 327
            |.:||.|:||.:|.|:|.::..||::...|:.:..:|::..||..||:.|..|.||:.||     
  Rat   265 WINAATQIFFSLGLGFGSLIAFASYNEPSNDCQKHAVIVSVINSSTSIFASIVTFSIYGFKATFN 329

  Fly   328 ---------------------------LSE-----KSGIP--------------VES---VATGG 343
                                       |.|     .|..|              :||   .|..|
  Rat   330 YENCLNKVILLLTNSFDLEDGFLTASNLEEVKDYLASTYPNKYSEVFPHIRNCSLESELNTAVQG 394

  Fly   344 AGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIMSSILDEWYWVRSH--KCKLT 406
            .||||:.|.|||..:.|.|||::::||||.:||:.|:.....||::.:.|... :.|:  |..::
  Rat   395 TGLAFIVYAEAIKNMEVSQLWSVLYFFMLLMLGMGSMLGNTAAILTPLTDSKV-ISSYLPKEAIS 458

  Fly   407 LISCLIFLGLSSIMCTNGGMFILQLFDWYSSAIAVIVICLVEIIMVAWIYGIKNFMLDVEFMLGK 471
            .:.|||...:..:.....|.:...:|:.|::.:::::|.|||.|.|.::||::.|..|:..|.|:
  Rat   459 GLVCLINCAVGMVFTMEAGNYWFDIFNDYAATLSLLLIVLVETIAVCYVYGLRRFESDLRAMTGR 523

  Fly   472 RPTLYWRIVWQVVTPVIIIFILI---TSIVFIRTITYN----------NIPYPQWAIIIGWASCF 523
            ....||:.:|..|:|::||.:.|   :..:...|:.|.          ...||..|:.:......
  Rat   524 PLNWYWKAMWAFVSPLLIIGLFIFYLSDYILTGTLQYQAWDATQGQLVTKDYPPHALAVIGLLVA 588

  Fly   524 TSVMWIPLYIFYIMIRKR 541
            :|.|.|||......||.|
  Rat   589 SSTMCIPLVALGTFIRNR 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 192/592 (32%)
Slc6a20NP_579830.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 3/7 (43%)
SLC5-6-like_sbd 26..601 CDD:294310 189/588 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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