DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and slc6a8

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_002935539.1 Gene:slc6a8 / 100489909 XenbaseID:XB-GENE-986840 Length:644 Species:Xenopus tropicalis


Alignment Length:586 Identity:231/586 - (39%)
Similarity:352/586 - (60%) Gaps:41/586 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PPTTNATRKDKRIERDENRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMV 70
            ||..    |:...|||    .|.|:.:||:|.:|:|:|:|||||||||||::||..|||||:|:.
 Frog    48 PPNC----KEGIPERD----TWTSQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYILIA 104

  Fly    71 ILAGIPLFYMEILIGQFSSTGCTGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCF 135
            ||.|||:|::||.:|||...|...::.:.||.:|.|.|.||:..:|..||.:|:::.:..:...|
 Frog   105 ILGGIPIFFLEIALGQFMKAGSIAVWNIAPLFQGIGFASVVIVFFCNTYYILILTWGVYYLVKSF 169

  Fly   136 FKKVPWEDCSNSWNTDDCV-----------TA-SDMGKQNSSDVFKTSAD------EFFHLEVLR 182
            ...:||..|:|:||:.|||           || |..|....:::    ||      ||:..:|||
 Frog   170 SAVLPWSHCNNTWNSPDCVDIFRQEDCTNGTANSTFGNLTCNEL----ADKVSPITEFWEKKVLR 230

  Fly   183 ISTDISDLGGMVWEQLTALIITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGA 247
            :|:.:.|:|.:.||.|..||..|:::|||:.:|:||.||:||||..|||::|.|||:|||.||||
 Frog   231 LSSGLDDIGSINWELLLCLIGCWLLVYFCVWKGVKSTGKIVYFTATFPYVVLLILLVRGAMLPGA 295

  Fly   248 WKGIKFYLYPEWHRLLDLKVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVF 312
            .:||.:||.|:|.:|...:||.||..|:||....|.|.:..:.|::.|.|:...|:.::..||..
 Frog   296 TEGIIYYLKPDWSKLGTAQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNDCYKDAFILAVINSG 360

  Fly   313 TSLLAGFVVFSVLGFLSEKSGIPVESVATGGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGI 377
            ||..|||||||:|||::.:.|:.:..||..|.||||:.||.|::|:||..||:.:|||||.|||:
 Frog   361 TSFFAGFVVFSILGFMANEQGVDISKVAESGPGLAFIAYPRAVSLMPVAPLWSALFFFMLLLLGL 425

  Fly   378 DSVFVQLEAIMSSILD---EWYWVRSHKCKLTLISCLIFLGLSSIMCTNGGMFILQLFDWYS-SA 438
            ||.||.:|.::::|||   ..|:.|..:.....|.|.|...:...|.|.|||::.||||:|| |.
 Frog   426 DSQFVGVEGLITAILDLLPARYYFRFQREIAVAICCAIMFLIDLSMLTEGGMYVFQLFDYYSASG 490

  Fly   439 IAVIVICLVEIIMVAWIYGIKNFMLDVEFMLGKRPTLYWRIVWQVVTPVIIIFILITSIVFIRTI 503
            :.::.....:.::|||:||...||.|:..|:|.||..:.:..|..|||.:.:.|.:.:::..:.:
 Frog   491 MTLLWQTFWQCVVVAWVYGADRFMDDIARMIGYRPFPWMKWCWSFVTPFVCMAIFLFNLINYKPL 555

  Fly   504 TYNN-IPYPQWAIIIGWASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLKP------LDWTPAD 561
            |||| ..||.|...|||....:|::.:|:...|.:...:.:|.:..:...||      |::...|
 Frog   556 TYNNSYTYPWWGEAIGWGFALSSMLCVPVTFLYKITCAKGSLRERWQHLTKPIWGAHHLEYMAPD 620

  Fly   562 P 562
            |
 Frog   621 P 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 220/552 (40%)
slc6a8XP_002935539.1 SLC5-6-like_sbd 58..644 CDD:382020 227/572 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.