DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and slc6a3

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_002933174.1 Gene:slc6a3 / 100488824 XenbaseID:XB-GENE-982873 Length:621 Species:Xenopus tropicalis


Alignment Length:556 Identity:219/556 - (39%)
Similarity:354/556 - (63%) Gaps:17/556 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TTNATRKDKRIERDE-NRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMVI 71
            |.:|.....:|..:. .|..|..|.:|:||::|:|:.:.||||||||||::||.|||:||:..::
 Frog    43 TNSALVSPSQINTENGERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYIFFMV 107

  Fly    72 LAGIPLFYMEILIGQFSSTGCTGMFRMTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCFF 136
            :||:||||||:.:|||:..|..|::::.|:.||.|...::::.|...:|:|||::.::.:|..|.
 Frog   108 IAGMPLFYMELALGQFNREGAAGVWKICPIFKGVGYTVILISLYVGFFYNVIIAWALQYLFSSFT 172

  Fly   137 KKVPWEDCSNSWNTDDCVTA-----SDMGKQNSSDVFK-TSADEFFHLEVLRI--STDISDLGGM 193
            .::||..|:||||:.:|...     ||......:|.:| |.|.|:|...||.:  |..|.|||..
 Frog   173 SELPWIHCNNSWNSPNCSETKYSNFSDYSLFGLNDTYKVTPAAEYFERGVLHLHESQGIHDLGSP 237

  Fly   194 VWEQLTALIITWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYPE 258
            .|:..:.||:..:.:||.|.:|:|:.||||:.|...||::|..||:||.|||||..|||.||..:
 Frog   238 RWKLTSCLIVVIVFLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAIDGIKAYLSVD 302

  Fly   259 WHRLLDLKVWADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFS 323
            :.||.:..||.|||.|:.|.:|.|:|.::..:|::.|.||...|:::..|:|..||..:|||:||
 Frog   303 FLRLCEASVWIDAATQICFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSVNSLTSFFSGFVIFS 367

  Fly   324 VLGFLSEKSGIPVESVATGGAGLAFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIM 388
            .||::::|..:|:..||..|.||.|:.||||||.||:..:|:::||.||..|||||....:|:::
 Frog   368 FLGYMAQKHNVPIGDVAKDGPGLIFIIYPEAIATLPLSSVWSVIFFIMLLTLGIDSAMGGMESVI 432

  Fly   389 SSILDEWYWVRSHKCKLTL--ISCLIFLGLSSIMCTNGGMFILQLFDWYSSAIAVIVICLVEIIM 451
            :.::||:.::|.|:...||  :.|..|..||.:  ||||:::..|.|.:::..:::...|:|.|.
 Frog   433 TGLIDEFKFLRRHRELFTLFIVLCTFFTSLSCV--TNGGIYVFTLLDHFAAGTSILFGVLIEAIG 495

  Fly   452 VAWIYGIKNFMLDVEFMLGKRPTLYWRIVWQVVTPVIIIFILITSIVFIRTITYNNIPYPQWAII 516
            :||.||:..|..|:|.|:||||.||||:.|:.|:|..::|:::.|||..|:..|.|..:|:||.:
 Frog   496 IAWFYGVGRFSDDIEEMIGKRPGLYWRLCWKFVSPCFLLFVVVVSIVTYRSPKYGNYTFPEWANV 560

  Fly   517 IGWASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRL 552
            |||....:|:..:|||..|    |.::|..|.::::
 Frog   561 IGWLVAISSMAMVPLYAIY----KFSSLHGSFREKI 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 216/539 (40%)
slc6a3XP_002933174.1 SLC6sbd_DAT1 60..615 CDD:212083 216/539 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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