DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ntl and slc6a19a.2

DIOPT Version :9

Sequence 1:NP_609135.1 Gene:Ntl / 34046 FlyBaseID:FBgn0267326 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_002665492.2 Gene:slc6a19a.2 / 100334171 ZFINID:ZDB-GENE-141210-16 Length:647 Species:Danio rerio


Alignment Length:634 Identity:196/634 - (30%)
Similarity:320/634 - (50%) Gaps:107/634 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KRIERDE--NRGQWKSKSEFILSLLGYAIGIGNVWRFPYLCYRSGGAAFLIPYLLMVILAGIPLF 78
            :::|..|  .|.:|.:|::::|:.:|:.:|:||||||||||...||.||:||:|::::|.||||.
Zfish    23 EKLELQEAGERPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLEGIPLL 87

  Fly    79 YMEILIGQFSSTGCTGMFR-MTPLLKGTGIAQVVVNAYCVCYYSVIISYPIRMIFYCFFKKVPWE 142
            ::|..|||....|..|::| :.|.|.|.|||.::|:.....||:.||::.:...|..|...:||.
Zfish    88 HLEFAIGQRLRRGSVGVWRSINPYLLGVGIASMLVSFIVGMYYNTIIAWVMWYFFNSFQDPLPWS 152

  Fly   143 DC----SNSWNTDDCVTASDMGKQNSSDVFKTSADEFFHLEVLRISTDISDLGGMVWEQLTALII 203
            .|    |.:....:|        :.||.|     |.|::.:.|..:..|.|.||:.|..:.:|:.
Zfish   153 QCPINGSRTGFVSEC--------ERSSPV-----DYFWYRKTLNTTPHIEDSGGLQWWMVLSLLC 204

  Fly   204 TWIIIYFCLMRGIKSVGKVVYFTVPFPYLLLFILLIRGATLPGAWKGIKFYLYPEWHRLLDLKVW 268
            .|.:::.|.:|||::.||.||.|...|||:|.|.||||.||.|:..||||...|:.:.|||.:.|
Zfish   205 AWTVLWVCCIRGIETTGKAVYITSTLPYLVLTIFLIRGLTLKGSVSGIKFLFTPDVNELLDPQTW 269

  Fly   269 ADAAVQMFFGIGPGWGGIVNMASFSSFRNNAKCDSVLIVSINVFTSLLAGFVVFSVLGF------ 327
            .||..|:||.....:||::..:|::|..||.:.|:|:|..||..||:.|..|::|::||      
Zfish   270 LDAGAQVFFSFSLAFGGLIAFSSYNSVHNNCEQDAVIISIINGMTSIYAAIVIYSIIGFRATERF 334

  Fly   328 ----------LSEKSGIPVESVATG------------------------------------GAGL 346
                      |.....:|..|:..|                                    |.||
Zfish   335 DDCLNGNILSLLNAFDLPEGSIIEGNYTEAIQQLNISRPDIIQELQLKTCDMQTFLSQGVEGTGL 399

  Fly   347 AFVTYPEAIALLPVPQLWALMFFFMLFLLGIDSVFVQLEAIMSSILD------EWYWVRSHKCKL 405
            ||:.:.|||..:||..||:::||.|||.||:.::|..:|.::..:.|      .|     .|...
Zfish   400 AFIVFTEAITKMPVSPLWSVLFFIMLFCLGLSTMFGSIEGVVVPLQDLDILPKNW-----PKEAY 459

  Fly   406 TLISCLIFLGLSSIMCTNGGMFILQLFDWYSSAIAVIVICLVEIIMVAWIYGIKNFMLDVEFMLG 470
            |.:.|::....:.|.....|.:.|.|||.::.:|.:::|...|::.|:::|||..|..|::||:|
Zfish   460 TALVCVVSFAFAIIFAQGSGEYWLALFDGFAVSIPLLIIAFCEMMAVSYVYGIDRFNDDIKFMIG 524

  Fly   471 KRPTLYWRIVWQVVTPVIIIFILITSIVFIRTI-----------------TYNNIPYPQWAIIIG 518
            .:|.::|:..|::::|:|::.|.:  ..|:.|:                 |.:.:|||.|...|.
Zfish   525 HKPNIFWQATWRLISPLIVLVIFL--FYFVTTVSKKLTYIAWDPESENFPTLSVLPYPGWISAII 587

  Fly   519 WASCFTSVMWIPLYIFYIMIRKRATLCDSLKKRLKPLDWTPADPQDRAE 567
            :......|:.||......:||.|.  |   ||.......||....||.:
Zfish   588 FILAGIPVLVIPTVALVRLIRNRC--C---KKEETHATETPYSISDRVQ 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtlNP_609135.1 SLC5-6-like_sbd 24..554 CDD:294310 190/609 (31%)
slc6a19a.2XP_002665492.2 SLC5-6-like_sbd 33..613 CDD:294310 188/604 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.