DRSC/TRiP Functional Genomics Resources

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Protein Alignment POTEA and ACT1

DIOPT Version :9

Sequence 1:XP_024302914.1 Gene:POTEA / 340441 HGNCID:33893 Length:559 Species:Homo sapiens
Sequence 2:NP_116614.1 Gene:ACT1 / 850504 SGDID:S000001855 Length:375 Species:Saccharomyces cerevisiae


Alignment Length:318 Identity:60/318 - (18%)
Similarity:114/318 - (35%) Gaps:83/318 - (26%)


- Green bases have known domain annotations that are detailed below.


Human   111 NSEVVSLLLDR---QCQLHVFDSKKRTALIKAV----------------------QCQEDECALM 150
            :|||.:|::|.   .|:..........|:..::                      :.|.....|.
Yeast     2 DSEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILT 66

Human   151 L---LQHGTDPNLPDMYGNTALHYAVYNEDKLMAK--TLLLYGADIESK-NKGGLTPLLLAVHGQ 209
            |   ::||...|..||  ....|:..|||.::..:  .:||..|.:..| |:..:|.::.    :
Yeast    67 LRYPIEHGIVTNWDDM--EKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMF----E 125

Human   210 KQRMVKFLIKKKANLNALDRFGRTALILAVRCGSASIVSL---------LLQQNIDVFSQDV--- 262
            ...:..|.:..:|.|:.......|.::|....|...:|.:         :|:  ||:..:|:   
Yeast   126 TFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILR--IDLAGRDLTDY 188

Human   263 -----------FGQTAEDYAVSSHHSIICQLLSDYKENQMPNNSSGNSNPEQDLKLTSEE----E 312
                       |..|||...|......:|.:..|:::..  ..::.:|:.|:..:|...:    .
Yeast   189 LMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEM--QTAAQSSSIEKSYELPDGQVITIG 251

Human   313 PQRLKGSENSQHEKV----------TQEPDINKDCDREVEEEMQKHGSNNVGLSENLT 360
            .:|.:..|...|..|          |....|.| ||.:|.:|:.    .|:.:|...|
Yeast   252 NERFRAPEALFHPSVLGLESAGIDQTTYNSIMK-CDVDVRKELY----GNIVMSGGTT 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POTEAXP_024302914.1 ANK 93..218 CDD:238125 26/137 (19%)
ANK repeat 100..129 CDD:293786 6/20 (30%)
ANK repeat 133..162 CDD:293786 7/53 (13%)
ANK 159..283 CDD:238125 30/149 (20%)
ANK repeat 164..195 CDD:293786 8/33 (24%)
ANK repeat 197..228 CDD:293786 4/30 (13%)
ANK repeat 230..261 CDD:293786 7/39 (18%)
SMC_N <302..538 CDD:330553 16/73 (22%)
CCDC144C 452..>559 CDD:317340
ACT1NP_116614.1 NBD_sugar-kinase_HSP70_actin 1..375 CDD:418402 60/318 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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