DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18585 and sdc-3

DIOPT Version :9

Sequence 1:NP_001260213.1 Gene:CG18585 / 34041 FlyBaseID:FBgn0031929 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_506703.1 Gene:sdc-3 / 180009 WormBaseID:WBGene00004747 Length:2150 Species:Caenorhabditis elegans


Alignment Length:455 Identity:76/455 - (16%)
Similarity:134/455 - (29%) Gaps:185/455 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KERYDNFRVYKLTIQNKI--QLAAIEKIGELTKKYNIWKEYDERSRQIDIM------VSPGELNH 80
            ||..|:  :..||:..::  |:|.||.:.:.:.......:|.....:::||      :...|..|
 Worm   379 KECIDD--MINLTVCQELIPQVATIETVRDYSGVEQHRLKYIRPENELEIMFQLATVLVKNENTH 441

  Fly    81 FQELL------------------------------------KFNNISSELMIEN--------VQE 101
            .||:.                                    ||...|.||:.:.        :..
 Worm   442 DQEITSPMFALLRTEQYLWSIPLRPFLRMYTDWRKTKLNFKKFRKFSPELVSKAPIDLFKVFLTT 506

  Fly   102 RIDEEQVTPTADSATFGWTKYYELEEIEAWLDEILNAYPSVTEEFIVGKSYEGRTIRGIKISHKA 166
            .:|::.|. |.|:..|.:....|::::  :.:|.:...|      |:......|....:......
 Worm   507 NMDKKGVA-TKDTDCFDYRTASEIKKL--YHEEFIRVRP------IIEHQRFHRCYTSVITEEPL 562

  Fly   167 GNPGIFIESNIHAREWITSASATWFINQLLTSEDADVRSLADNYDWHIIPVFNVDGFEYSHKKDR 231
            .||..:    :|..:|.......|         ...|:.||..:.|                   
 Worm   563 PNPFYW----VHRGQWEKVYECNW---------KQRVKPLAGRFSW------------------- 595

  Fly   232 MWRKTRQPHATNACIGADANRNFDSYWLQNNGASDNPCSETFAGDNPESEPEAKALVEYLTKIQD 296
               ||:.|   |.|                              |.|..|.:.|..:|.|.|:::
 Worm   596 ---KTKHP---NIC------------------------------DLPRLEKDDKQEMEMLAKMRE 624

  Fly   297 QISVYISFHSYGQYLLSPYGHTNEEFPENYNDILTIGKAFADAIEALPYGTVYQYGSTAD-VLYV 360
            :|              ..|....|:.|...:             .:||     ::.||:| |.:.
 Worm   625 KI--------------REYNKEKEKHPFYVS-------------SSLP-----EFASTSDFVKFP 657

  Fly   361 ATGTSVDWVFNELGKK------IGYT----IEYRDKGRYGFILPPVQIIPNCEELMVGMLALIEK 415
            .:.|.:.:......:.      :.||    .|..||   .|..|        ||.|:....|:||
 Worm   658 ISNTGIKYTAPRRNQPKVQRSLVTYTRFRLAELEDK---DFSFP--------EEKMLEKNRLLEK 711

  Fly   416  415
             Worm   712  711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18585NP_001260213.1 Propep_M14 34..105 CDD:280416 18/122 (15%)
M14_CP_A-B_like 122..415 CDD:199844 48/303 (16%)
sdc-3NP_506703.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165675
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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