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Protein Alignment CG18585 and Cpa1

DIOPT Version :9

Sequence 1:	NP_001260213.1	Gene:	CG18585 / 34041	FlyBaseID:	FBgn0031929	Length:	422	Species:	Drosophila melanogaster
Sequence 2:	NP_079626.2	Gene:	Cpa1 / 109697	MGIID:	88478	Length:	419	Species:	Mus musculus

Alignment Length:	431	Identity:	148/431 - (34%)
Similarity:	247/431 - (57%)	Gaps:	22/431 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MRLLWLLATLVALTSAGILKDSPKERYDNFRVYKLTIQNKIQLAAIEKIGELTK-KYNIWKEYDE 64
            |:.|.:|:.|:|....       .|.:...:|.:::..::.|:..:.::.||.. |.:.|::...
Mouse     1 MKRLLVLSVLLAAVFG-------NENFVGHQVLRISATDEAQVQKVRELEELEHLKLDFWRDPAR 58

  Fly    65 RSRQIDIMVSPGELNHFQELLKFNNISSELMIENVQERIDEEQVTPTADSA------TFGWTKYY 123
            ....||:.|....:...:..|::::||.|:|||:||..:|||:...:|..|      .|.:..|:
Mouse    59 AGLPIDVRVPFPTIQSVKAFLEYHDISYEIMIEDVQSLLDEEKQQMSAFQARALSTDAFNYATYH 123

  Fly   124 ELEEIEAWLDEILNAYPSVTEEFIVGKSYEGRTIRGIKISHKAGN-PGIFIESNIHAREWITSAS 187
            .|:||..::|.::..:|.:..:..:|.::|||.|..:|.|....| |.|:|::.||:|||:|.||
Mouse   124 TLDEIYEFMDLLVTEHPQLVSKIQIGSTFEGRPINVLKFSTGGTNRPAIWIDTGIHSREWVTQAS 188

  Fly   188 ATWFINQLLT--SEDADVRSLADNYDWHIIPVFNVDGFEYSHKKDRMWRKTRQPHATNACIGADA 250
            ..||..::..  .::..:.::.||.|..:..|.|.|||.|:||.:|||||||.....:.|:|.|.
Mouse   189 GVWFAKKITKDYGQEPTLTAILDNMDIFLEIVTNPDGFVYTHKTNRMWRKTRSHTEGSLCVGVDP 253

  Fly   251 NRNFDSYWLQNNGASDNPCSETFAGDNPESEPEAKALVEYLTKIQDQISVYISFHSYGQYLLSPY 315
            |||:|:.: ...|||.||||||:.|..|.||.|.|::|:::|. ...|..:||.|||.|.||.||
Mouse   254 NRNWDAAF-GMPGASSNPCSETYRGKFPNSEVEVKSIVDFVTS-HGNIKAFISIHSYSQLLLYPY 316

  Fly   316 GHTNEEFPENYNDILTIGKAFADAIEALPYGTVYQYGSTADVLYVATGTSVDWVFNELGKKIGYT 380
            |:|:|..|:. .::..:.|:...|:.:| :||.::|||..|.:|.|:|:::||.::: |.|..:|
Mouse   317 GYTSEPAPDK-EELDQLAKSAVTALTSL-HGTKFKYGSIIDTIYQASGSTIDWTYSQ-GIKYSFT 378

  Fly   381 IEYRDKGRYGFILPPVQIIPNCEELMVGMLALIEKTKELGY 421
            .|.||.|..||:||..||||..||..:.:|.:::.|.:..|
Mouse   379 FELRDTGLRGFLLPASQIIPTAEETWLALLTIMDHTVKHPY 419

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.