DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slob and pxk

DIOPT Version :9

Sequence 1:NP_001260212.1 Gene:Slob / 34038 FlyBaseID:FBgn0264087 Length:1347 Species:Drosophila melanogaster
Sequence 2:NP_001076277.1 Gene:pxk / 557065 ZFINID:ZDB-GENE-050208-393 Length:575 Species:Danio rerio


Alignment Length:644 Identity:153/644 - (23%)
Similarity:252/644 - (39%) Gaps:157/644 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LTQQPSHNSHHNPQTPKSVSILVYKTLNTVFKSSRKIIVRVCEVASAKKSFTMFKFNKAAQQQRI 136
            :.|||...|...|....:|.:......:...:|..:.|:||....|...|:|:.:     :....
Zfish     4 MEQQPQPLSGRKPPLDDTVPLSAVIEASQSLQSHTEYIIRVQRGVSTDNSWTVIR-----RYSDF 63

  Fly   137 D--NRNSAVTGHDPFVRPPVPEKKVRNIMKK---LHKANGLKRSNSAIEFDVSALTAANRRQIYS 196
            |  |.:..::|    :..|:|.||:...|.:   ..:..||:          :.|....:..|..
Zfish    64 DMLNNSLLISG----LNLPLPPKKLLGNMDREFIAERQKGLQ----------AYLNYITQHHILC 114

  Fly   197 RPNIKYQYSALDSGNGIVERSPRERAQREKALNATQEWIQGANGRYEVIAHLDEIGSRHGKNWFL 261
            ...:..::  ||:.|.....:       |.||.....:.: ::.::|||..|.:||.|..|.:||
Zfish   115 SCELVKKF--LDTNNYSANYT-------EIALQQVSMFFR-SDPKWEVIEPLKDIGWRLRKRYFL 169

  Fly   262 VTDASVRTDRLQTLLPLPPDCVAFEDLPPNECAR----EILMELLGSLHHPYIYPVLDLGFLRNS 322
            |.|..         .|.....:::.||.|::...    :..|:||.:|.|..|.||    ....:
Zfish   170 VKDKD---------QPKEKQVLSWVDLGPDKFLSDKDLQSAMKLLPTLSHSNISPV----SFATT 221

  Fly   323 SYNYACLVTPFNSRGSLKDLIYKAQWNEPWARKY--TRKPNGLPVSQVQRLGRQILEALLFLKER 385
            |.:.|.::..|:.:|:|:|.|.|.:..||:.|||  .:|..||.:.|::..||||||||.||.::
Zfish   222 SESSALIIRVFSEKGTLRDHICKVKPKEPFLRKYCNPKKIQGLELQQIRTFGRQILEALKFLHDK 286

  Fly   386 GFPLHGHLHSGNVILQNGAARLSGLENGLLGLSSRINA-VMWSRSVTEIENVDIVCFGHLLYEMC 449
            ||| :||||:.||:::....:|..:||.||||.|.... |...|.:...|::|:..||||||||.
Zfish   287 GFP-YGHLHASNVLIEENTCKLLDVENSLLGLPSYYRPYVTQFRKINTTESIDVYSFGHLLYEMT 350

  Fly   450 TGQELTTPKPSMRVLEMELQHYPQIGQILEILGLIFEPPSGVCPSVEDLVLCDLFRSIDLRELRG 514
            .|:    |..::.|.:.....:..|..:|:.: |..|......|:|..|:...||..:.|     
Zfish   351 YGR----PPDAVPVDQCPPAPFSSIVSVLQSI-LSTEACKTGMPTVSQLLQTPLFYDVLL----- 405

  Fly   515 PCFSTIKPSLSRSTLNLLQAVKKRQCASLGHSLSEANSPCTPPSTPHDRRTGISRTMDSFDISSD 579
              |::.||....|: .|.:|:|                                          .
Zfish   406 --FNSEKPQFKISS-KLKEALK------------------------------------------S 425

  Fly   580 SEEGLLEEIVVGGSCHRQH--LLRLQQWHSAHSYVHSYASESPIHYCDPAAVYSDDNSQEPGQDP 642
            |:|||.:.:|.......||  |.|.|..|.                                   
Zfish   426 SKEGLEKRLVEEQRTIHQHKRLTRAQSHHG----------------------------------- 455

  Fly   643 QPPTIRCSTSSQSNLDVLLAEGAADEVYEEQEEEGFEQEEEASGSSGTQRLQAPACTSS 701
                   |...:....:|..:.:....||.:|:...:....::||..:   ..|.|.||
Zfish   456 -------SEEEKRKRKILARKKSRQSTYEIEEDLSVKYNNNSAGSGAS---SPPTCPSS 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlobNP_001260212.1 PKc 286..481 CDD:270622 72/201 (36%)
pxkNP_001076277.1 PX_MONaKA 17..136 CDD:132781 24/146 (16%)
PKc_like 193..395 CDD:304357 73/211 (35%)
WH2 544..571 CDD:280384
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D477171at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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