DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6739 and Lrp10

DIOPT Version :9

Sequence 1:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_075369.2 Gene:Lrp10 / 65107 MGIID:1929480 Length:713 Species:Mus musculus


Alignment Length:445 Identity:106/445 - (23%)
Similarity:139/445 - (31%) Gaps:168/445 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 SDVLGELFDCNLYPDAHESHKCEDPTRRRDYCYGNEFQCHDGS-------CIPQNWQC------- 451
            |:.|||              :|....:|   |.|: :.|.||:       |.|.::.|       
Mouse   325 SENLGE--------------RCYSEAQR---CDGS-WDCADGTDEEGCPGCPPGHFPCGAAGTPG 371

  Fly   452 --------DKIK---DCQGGEDEDEQCLVCEPDEFRCRSNEKCLVEKYRCDQNIDCMDGSDEQDC 505
                    |:..   .|..|.|| .:|..|:|..|||| :|||:.|.:.||...||.|||||.||
Mouse   372 ATACYLPADRCNYQTFCADGADE-RRCRHCQPGNFRCR-DEKCVYETWVCDGQPDCTDGSDEWDC 434

  Fly   506 DEYGSGDLAPFDESELNAFPRVFTYASFLS----------PNETNDKVYTYITATTDEDAG-TET 559
            .               .|.||....|:.:.          ......|:|...|......|. :..
Mouse   435 S---------------YALPRKVITAAVIGSLVCGLLLVIALGCTCKLYAIRTQEYSIFAPLSRM 484

  Fly   560 KFQIHQVAAP-----------APPVNSSAEEGAGGPKGFVNFRDSKEIM---MTSDSETKFKYSQ 610
            :.:|.|..||           .|||.....|.........|.|...:|:   ||....:..:..|
Mouse   485 EAEIVQQQAPPSYGQLIAQGAIPPVEDFPTENPNDNSVLGNLRSLLQILRQDMTPGGTSGGRRRQ 549

  Fly   611 RAN----------------RTSVKFSVSAPTTPAARTSSAIPSSALVQQRERTTSTTTTSTTTST 659
            |..                ||:.  ...||.|.:..|.| :||.||           ..||..:.
Mouse   550 RGRSIRRLVRRLRRWGLLPRTNT--PARAPETRSQVTPS-VPSEAL-----------DDSTGQAC 600

  Fly   660 TTSSI------------TSTPSITSTTLIPINAATSEPNPYEVVTSLGGCP--PQELRCVSGKCI 710
            ...::            ..||..|.:|| |..|..|||.        |..|  |.|...:||   
Mouse   601 EGGAVGGQDGEQAPPLPIKTPIPTPSTL-PALATVSEPP--------GPLPSVPVESSLLSG--- 653

  Fly   711 TVSQLCDKQIDCPDAADELMCVYRERPSRRRLTSTTAPPTTSSAPPETSTATTTT 765
             |.|:.                      |.||    .|...|..|..|.|.|.||
Mouse   654 -VVQVL----------------------RGRL----LPSLWSPGPTWTQTGTHTT 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 5/25 (20%)
LDLa 432..464 CDD:238060 12/56 (21%)
LDLa 470..505 CDD:238060 19/34 (56%)
LDLa 697..731 CDD:238060 7/35 (20%)
Lrp10NP_075369.2 CUB 35..135 CDD:238001
LDLa 141..175 CDD:238060
CUB 193..303 CDD:238001
LDLa <331..354 CDD:238060 7/26 (27%)
LDLa 400..434 CDD:238060 19/34 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 566..636 20/84 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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